Center for Computational Sciences

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  • 2024

    Metal-Mediated Ligand Affinity Chemistry (MLAC)

    Gukathasan, S. & Awuah, S. G., 2024, Methods in Molecular Biology. p. 85-97 13 p. (Methods in Molecular Biology; vol. 2720).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Molecular mechanisms of dopaminergic transmission in NeuroHIV

    Zhu, J., Davis, S. E., Zhan, C. G. & McLaughlin, J. P., Jan 1 2024, HIV-Associated Neurocognitive Disorders. p. 379-398 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Smartphone App Design for Product Use Sustainability Evaluation

    Russell, M., Hong, P., Blakely, L., Kirkham, M., Enyoghasi, C., Wang, P. & Badurdeen, F., Jan 1 2024, EcoDesign for Sustainable Products, Services and Social Systems II. p. 401-411 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • The Merger Dynamics of the X-ray-Emitting Plasma in Clusters of Galaxies

    ZuHone, J. & Su, Y., Jan 1 2024, Handbook of X-ray and Gamma-ray Astrophysics. p. 5005-5048 44 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Using 3-Dimensional Cultures to Propagate Genetically Modified Lung Organoids

    Chen, F., Naughton, K. J., Lee, J. H. & Brainson, C. F., 2024, Methods in Molecular Biology. p. 19-30 12 p. (Methods in Molecular Biology; vol. 2805).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2023

    Insecticidal proteins and RNAi in the control of insects

    Vélez, A. M., Narva, K., Darlington, M., Mishra, S., Hellmann, C., Rodrigues, T. B., Duman-Scheel, M., Palli, S. R. & Jurat-Fuentes, J. L., Jan 2023, Insecticidal Proteins and RNAi in the Control of Insects. p. 1-54 54 p. (Advances in Insect Physiology; vol. 65).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Juvenile hormone receptor Methoprene tolerant: Functions and applications

    Palli, S. R., Jan 2023, Hormone Receptors: Structures and Functions. Litwack, G. (ed.). p. 619-644 26 p. (Vitamins and Hormones; vol. 123).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    6 Scopus citations

  • Whole-Mount In Situ Hybridization (WISH) for Salamander Embryos and Larvae

    Purushothaman, S. & Seifert, A. W., 2023, Methods in Molecular Biology. p. 95-107 13 p. (Methods in Molecular Biology; vol. 2562).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations
  • 2022

    A remarkable rodent: Regeneration and reproduction in spiny mice (Acomys)

    Seifert, A. W. & Temple-Smith, P., Jan 2022, Emerging Model Systems in Developmental Biology. Goldstein, B. & Srivastava, M. (eds.). p. 659-707 49 p. (Current Topics in Developmental Biology; vol. 147).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Circadian rhythms

    Cassone, V. M. & Kumar, V., Jan 1 2022, Sturkie's Avian Physiology. p. 1143-1161 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Circannual cycles and photoperiodism

    Cassone, V. M. & Yoshimura, T., Jan 1 2022, Sturkie's Avian Physiology. p. 1163-1181 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Identification and Characterization of Transcription Factors Regulating Terpenoid Indole Alkaloid Biosynthesis in Catharanthus roseus

    Singh, S. K., Patra, B., Singleton, J. J., Liu, Y., Paul, P., Sui, X., Suttipanta, N., Pattanaik, S. & Yuan, L., 2022, Methods in Molecular Biology. p. 203-221 19 p. (Methods in Molecular Biology; vol. 2505).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Recombinant production and characterization of Par-4/SAC

    Zheng, F. & Zhan, C. G., Jan 1 2022, Tumor Suppressor Par-4: Role in Cancer and Other Diseases. p. 191-201 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Variance Control Procedures

    Weiss, H. L., Wu, J., Epnere, K. & Williams, O. D., Jan 1 2022, Principles and Practice of Clinical Trials. p. 833-841 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Virus-Induced Gene Silencing as a Tool to Study Regulation of Alkaloid Biosynthesis in Medicinal Plants

    Patra, B., Liu, Y., Singleton, J. J., Singh, S. K., Pattanaik, S. & Yuan, L., 2022, Methods in Molecular Biology. p. 155-164 10 p. (Methods in Molecular Biology; vol. 2469).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations
  • 2021

    A Simple Recovery Framework for Signals with Time-Varying Sparse Support

    Durgin, N., Grotheer, R., Huang, C., Li, S., Ma, A., Needell, D. & Qin, J., 2021, Association for Women in Mathematics Series. p. 211-230 20 p. (Association for Women in Mathematics Series; vol. 26).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Bilirubin: A ligand of the pparα nuclear receptor

    Hong, S., Gordon, D., Stec, D. E. & Hinds, T. D., Sep 28 2021, Nuclear Receptors: The Art and Science of Modulator Design and Discovery. p. 463-482 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    10 Scopus citations

  • Circadian organization of the Gut Commensal Bacterium Klebsiella aerogenes

    Graniczkowska, K. B. & Cassone, V. M., Jun 21 2021, Circadian Rhythms in Bacteria and Microbiomes. p. 351-364 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Computational Methods for Studying Group Communication

    Pilny, A., Jan 1 2021, The Emerald Handbook of Group and Team Communication Research. p. 109-133 25 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Fine-mesh exclusion netting for control of Drosophila suzukii

    Kuesel, R. & Gonthier, D., Mar 12 2021, Drosophila suzukii Management. p. 217-239 23 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Fractionation, characterization, and valorization of lignin derived from engineered plants

    Liu, E., Li, W., DeBolt, S., Nokes, S. E. & Shi, J., Jun 1 2021, Emerging Technologies for Biorefineries, Biofuels, and Value-Added Commodities. p. 245-288 44 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • High-resolution photoelectron spectroscopy

    Yang, D. S., Jul 21 2021, Comprehensive Coordination Chemistry III. Vol. 1-9. p. 217-240 24 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Human motion recognition and prediction for robot control

    Gao, R. X., Wang, L., Wang, P., Zhang, J. & Liu, H., Jun 10 2021, Advanced Human-Robot Collaboration in Manufacturing. p. 261-282 22 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    5 Scopus citations

  • Internalizing cooperative norms in group-structured populations

    Akçay, E. & Van Cleve, J., Feb 25 2021, Cooperation and Conflict: The Interaction of Opposites in Shaping Social Behavior. p. 26-44 19 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    5 Scopus citations

  • The fundamental role of aggression and conflict in the evolution and organization of social groups

    Rittschof, C. C. & Grozinger, C. M., Feb 25 2021, Cooperation and Conflict: The Interaction of Opposites in Shaping Social Behavior. p. 212-233 22 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • The physics of the n-n’ system versus B0 → J=/Ψ n(n’) and Bs → J=/Ψ n(n’) decays

    Andreichikov, M. A., Eides, M. I., Novikov, V. A. & Vysotsky, M. I., Jan 1 2021, Gribov-90 Memorial Volume: Field Theory, Symmetry, And Related Topics - Proceedings Of The Memorial Workshop Devoted To The 90th Birthday Of V N Gribov. p. 191-200 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Two-stage Geometric Information Guided Image Reconstruction

    Qin, J. & Guo, W., 2021, Association for Women in Mathematics Series. p. 3-23 21 p. (Association for Women in Mathematics Series; vol. 26).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2019

    A Sparse Areal Mixed Model for Multivariate Outcomes, with an Application to Zero-Inflated Census Data

    Musgrove, D., Young, D. S., Hughes, J. & Eberly, L. E., 2019, STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics and Health. p. 51-74 24 p. (STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics and Health).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Compressed Anomaly Detection with Multiple Mixed Observations

    Durgin, N., Grotheer, R., Huang, C., Li, S., Ma, A., Needell, D. & Qin, J., 2019, Association for Women in Mathematics Series. p. 211-237 27 p. (Association for Women in Mathematics Series; vol. 17).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Genome-wide determination of poly(A) sites in medicago truncatula: Evolutionary conservation of alternative poly(A) site choice

    Wu, X., Hunt, A. G. & Li, Q. Q., Dec 13 2019, The Model Legume Medicago truncatula. p. 911-920 10 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Missing data augmentation for bayesian exponential random multi-graph models

    Krause, R. W. & Caimo, A., 2019, Springer Proceedings in Complexity. p. 63-72 10 p. (Springer Proceedings in Complexity).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Parasite Control Programs

    Fleming, S. A., Nielsen, M. K. & Ballweber, L. R., Jan 1 2019, Large Animal Internal Medicine. p. 1669-1693.e5

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Recent advances in the computational characterization of π-conjugated organic semiconductors

    Brédas, J. L., Chen, X., Körzdörfer, T., Li, H., Risko, C., Ryno, S. M. & Wang, T., Mar 27 2019, Conjugated Polymers: Perspective, Theory, and New Materials. p. 37-106 70 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Sparse Randomized Kaczmarz for Support Recovery of Jointly Sparse Corrupted Multiple Measurement Vectors

    Durgin, N., Grotheer, R., Huang, C., Li, S., Ma, A., Needell, D. & Qin, J., 2019, Association for Women in Mathematics Series. p. 1-14 14 p. (Association for Women in Mathematics Series; vol. 17).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations
  • 2018

    An epigenetic spin to ALS and FTD

    Ebbert, M. T. W., Lank, R. J. & Belzil, V. V., 2018, Advances in Neurobiology. p. 1-29 29 p. (Advances in Neurobiology; vol. 20).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    5 Scopus citations

  • Superfluids and supersolids on frustrated two-dimensional lattices

    Murthy, G., Arovas, D. & Auerbach, A., Jun 12 2018, SIGMETRICS 2018 - Abstracts of the 2018 ACM International Conference on Measurement and Modeling of Computer Systems. 5 ed. p. 3104-3121 18 p. (SIGMETRICS 2018 - Abstracts of the 2018 ACM International Conference on Measurement and Modeling of Computer Systems; vol. 55, no. 5).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    115 Citations (SciVal)
  • 2017

    Noncovalent Interactions in Organic Electronic Materials

    Ravva, M. K., Risko, C. & Brédas, J. L., Jan 1 2017, Non-Covalent Interactions in Quantum Chemistry and Physics: Theory and Applications. p. 277-302 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    11 Scopus citations

  • Sensors to Control Processing and Improve Lifetime and Performance for Sustainable Manufacturing

    Gao, R. X. & Wang, P., Jul 4 2017, Encyclopedia of Sustainable Technologies. p. 447-462 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations
  • 2016

    Cheirogaleid diversity and evolution: Big questions about small primates

    Yoder, A. D., Weisrock, D. W., Rasoloarison, R. M. & Kappeler, P. M., Apr 7 2016, The Dwarf and Mouse Lemurs of Madagascar: Biology, Behavior and Conservation Biogeography of the Cheirogaleidae. p. 3-20 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    8 Scopus citations

  • Hormonal regulation of development and reproduction

    Palli, S. R., Jan 1 2016, Management of Insect Pests to Agriculture: Lessons Learned from Deciphering their Genome, Transcriptome and Proteome. p. 97-114 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    6 Scopus citations

  • Lung Cancer Stem Cells: Drivers of a Genetically and Histologically Complex Disease

    Fillmore Brainson, C. & Kim, C. F., Sep 1 2016, Cancer Stem Cells: Targeting the Roots of Cancer, Seeds of Metastasis, and Sources of Therapy Resistance. p. 149-175 27 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • RNA interference: History, mechanisms, and applications in pest management

    Palli, S. R., Jan 1 2016, Arthropod Diversity and Conservation in the Tropics and Sub-Tropics. p. 397-413 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Spectral Modeling in Astrophysics—The Physics of Non-equilibrium Clouds

    Ferland, G. J. & Williams, R. J. R., 2016, Springer Series on Atomic, Optical, and Plasma Physics. p. 153-180 28 p. (Springer Series on Atomic, Optical, and Plasma Physics; vol. 90).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Structural-based models of ventricular myocardium

    Lee, L. C., Wenk, J., Klepach, D., Kassab, G. S. & Guccione, J. M., Jan 1 2016, Structure-Based Mechanics of Tissues and Organs. p. 249-263 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    6 Scopus citations

  • The GENI desktop

    Griffioen, J., Fei, Z., Nasir, H., Carpenter, C., Reed, J., Wu, X. & Rivera P., S., Jan 1 2016, The GENI Book. p. 381-406 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Understanding the Relationships Among Molecular Structure, Excited-State Properties, and Polarizabilities of π-Conjugated Chromophores

    Gieseking, R. L., Risko, C., Marder, S. R. & Brédas, J. L., Aug 1 2016, Basic Concepts. Vol. 1. p. 393-419 27 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    2 Scopus citations
  • 2015

    Equine Protozoal Myeloencephalitis

    Furr, M. & Howe, D. K., Aug 3 2015, Equine Neurology: Second Edition. p. 285-305 21 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Internal Parasite Screening and Control

    Nielsen, M. K., 2015, Robinson's Current Therapy in Equine Medicine: Seventh Edition. p. 336-340 5 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Methods for determining toxic organic compounds in wetlands

    D’Angelo, E., Jan 1 2015, Methods in Biogeochemistry of Wetlands. p. 815-839 25 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • System integration and packaging

    Ko, W., Wang, P. & Lachhman, S., Jan 27 2015, Implantable Biomedical Microsystems: Design Principles and Applications. p. 113-136 24 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations