Center for Computational Sciences

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  • 2024

    Genome editing in pests: basic science to applications

    Chen, X. & Palli, S. R., 2024, (Accepted/In press) In: Journal of Pest Science.

    Research output: Contribution to journalReview articlepeer-review

  • GLUCOCORTICOIDS, THEIR USES, SEXUAL DIMORPHISMS, AND DISEASES: NEW CONCEPTS, MECHANISMS, AND DISCOVERIES

    Martinez, G. J., Appleton, M., Kipp, Z. A., Loria, A. S., Min, B. & Hinds, T. D., Jan 2024, In: Physiological Reviews. 104, 1, p. 473-532 60 p.

    Research output: Contribution to journalReview articlepeer-review

  • Peer review of clinical and translational research manuscripts: Perspectives from statistical collaborators

    Schulte, P. J., Goldberg, J. D., Oster, R. A., Ambrosius, W. T., Bonner, L. B., Cabral, H., Carter, R. E., Chen, Y., Desai, M., Li, D., Lindsell, C. J., Pomann, G. M., Slade, E., Tosteson, T. D., Yu, F. & Spratt, H., Jan 4 2024, In: Journal of Clinical and Translational Science. 8, 1, e20.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
  • Promises and Perils of Big Data: Philosophical Constraints on Chemical Ontologies

    Duke, R., McCoy, R., Risko, C. & Bursten, J. R. S., May 1 2024, In: Journal of the American Chemical Society. 146, 17, p. 11579-11591 13 p.

    Research output: Contribution to journalReview articlepeer-review

  • Will “Tall Oaks from Little Acorns Grow”? White Oak (Quercus alba) Biology in the Anthropocene

    Abbott, A. G., Staton, M. E., Lohtka, J. M., DeWald, L. E., Zhebentyayeva, T., Kapoor, B., Thomas, A. M., Larson, D. A., Hadziabdic, D., DeBolt, S., Nelson, C. D. & Carlson, J. E., Feb 2024, In: Forests. 15, 2, 269.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
  • 2023

    Biological implications of long-term anthelmintic treatment: what else besides resistance are we selecting for?

    Nielsen, M. K., Kaplan, R. M., Abbas, G. & Jabbar, A., Nov 2023, In: Trends in Parasitology. 39, 11, p. 945-953 9 p.

    Research output: Contribution to journalReview articlepeer-review

    2 Scopus citations
  • Breeding cereal rye (Secale cereale) for quality traits

    Brzozowski, L. J., Szuleta, E., Phillips, T. D., Van Sanford, D. A. & Clark, A. J., Jul 1 2023, In: Crop Science. 63, 4, p. 1964-1987 24 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Computational Approaches for Organic Semiconductors: From Chemical and Physical Understanding to Predicting New Materials

    Bhat, V., Callaway, C. P. & Risko, C., Jun 28 2023, In: Chemical Reviews. 123, 12, p. 7498-7547 50 p.

    Research output: Contribution to journalReview articlepeer-review

    16 Scopus citations
  • Cutting edge concepts: Does bilirubin enhance exercise performance?

    Flack, K. D., Vítek, L., Fry, C. S., Stec, D. E. & Hinds, T. D., Jan 11 2023, In: Frontiers in Sports and Active Living. 4, 1040687.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • Deep learning based real-time and in-situ monitoring of weld penetration: Where we are and what are needed revolutionary solutions?

    Yu, R., Cao, Y., Chen, H., Ye, Q. & Zhang, Y. M., May 5 2023, In: Journal of Manufacturing Processes. 93, p. 15-46 32 p.

    Research output: Contribution to journalReview articlepeer-review

    17 Scopus citations
  • Design and simulated performance of calorimetry systems for the ECCE detector at the electron ion collider

    Bock, F., Schmidt, N., Wang, P. K., Santiesteban, N., Horn, T., Huang, J., Lajoie, J., Munoz Camacho, C., Adkins, J. K., Akiba, Y., Albataineh, A., Amaryan, M., Arsene, I. C., Ayerbe Gayoso, C., Bae, J., Bai, X., Baker, M. D., Bashkanov, M., Bellwied, R., Benmokhtar, F., & 259 othersBerdnikov, V., Bernauer, J. C., Boeglin, W., Borysova, M., Brash, E., Brindza, P., Briscoe, W. J., Brooks, M., Bueltmann, S., Bukhari, M. H. S., Bylinkin, A., Capobianco, R., Chang, W. C., Cheon, Y., Chen, K., Chen, K. F., Cheng, K. Y., Chiu, M., Chujo, T., Citron, Z., Cline, E., Cohen, E., Cormier, T., Corrales Morales, Y., Cotton, C., Crafts, J., Crawford, C., Creekmore, S., Cuevas, C., Cunningham, J., David, G., Dean, C. T., Demarteau, M., Diehl, S., Doshita, N., Dupré, R., Durham, J. M., Dzhygadlo, R., Ehlers, R., El Fassi, L., Emmert, A., Ent, R., Fanelli, C., Fatemi, R., Fegan, S., Finger, M., Frantz, J., Friedman, M., Friscic, I., Gangadharan, D., Gardner, S., Gates, K., Geurts, F., Gilman, R., Glazier, D., Glimos, E., Goto, Y., Grau, N., Greene, S. V., Guo, A. Q., Guo, L., Ha, S. K., Haggerty, J., Hayward, T., He, X., Hen, O., Higinbotham, D. W., Hoballah, M., Hoghmrtsyan, A., Hsu, P. H. J., Huber, G., Hutson, A., Hwang, K. Y., Hyde, C. E., Inaba, M., Iwata, T., Jo, H. S., Joo, K., Kalantarians, N., Kalicy, G., Kawade, K., Kay, S. J. D., Kim, A., Kim, B., Kim, C., Kim, M., Kim, Y., Kistenev, E., Klimenko, V., Ko, S. H., Korover, I., Korsch, W., Krintiras, G., Kuhn, S., Kuo, C. M., Kutz, T., Lawrence, D., Lebedev, S., Lee, H., Lee, J. S. H., Lee, S. W., Lee, Y. J., Li, W., Li, W. B., Li, X., Liang, Y. T., Lim, S., Lin, C. H., Lin, D. X., Liu, K., Liu, M. X., Livingston, K., Liyanage, N., Llope, W. J., Loizides, C., Long, E., Lu, R. S., Lu, Z., Lynch, W., Mantry, S., Marchand, D., Marcisovsky, M., Markert, C., Markowitz, P., Marukyan, H., McGaughey, P., Mihovilovic, M., Milner, R. G., Milov, A., Miyachi, Y., Mkrtchyan, A., Monaghan, P., Montgomery, R., Morrison, D., Movsisyan, A., Mkrtchyan, H., Murray, M., Nagai, K., Nagle, J., Nakagawa, I., Nattrass, C., Nguyen, D., Niccolai, S., Nouicer, R., Nukazuka, G., Nycz, M., Okorokov, V. A., Orešić, S., Osborn, J. D., O'Shaughnessy, C., Paganis, S., Papandreou, Z., Pate, S. F., Patel, M., Paus, C., Penman, G., Perdekamp, M. G., Perepelitsa, D. V., Periera da Costa, H., Peters, K., Phelps, W., Piasetzky, E., Pinkenburg, C., Prochazka, I., Protzman, T., Purschke, M. L., Putschke, J., Pybus, J. R., Rajput-Ghoshal, R., Rasson, J., Raue, B., Read, K. F., Røed, K., Reed, R., Reinhold, J., Renner, E. L., Richards, J., Riedl, C., Rinn, T., Roche, J., Roland, G. M., Ron, G., Rosati, M., Royon, C., Ryu, J., Salur, S., Santos, R., Sarsour, M., Schambach, J., Schmidt, A., Schwarz, C., Schwiening, J., Seidl, R., Sickles, A., Simmerling, P., Sirca, S., Sharma, D., Shi, Z., Shibata, T. A., Shih, C. W., Shimizu, S., Shrestha, U., Slifer, K., Smith, K., Sokhan, D., Soltz, R., Sondheim, W., Song, J., Strakovsky, I. I., Steinberg, P., Stepanov, P., Stevens, J., Strube, J., Sun, P., Sun, X., Suresh, K., Tadevosyan, V., Tang, W. C., Tapia Araya, S., Tarafdar, S., Teodorescu, L., Thomas, D., Timmins, A., Tomasek, L., Trotta, N., Trotta, R., Tveter, T. S., Umaka, E., Usman, A., van Hecke, H. W., Van Hulse, C., Velkovska, J., Voutier, E., Wang, Q., Wang, Y., Watts, D. P., Wickramaarachchi, N., Weinstein, L., Williams, M., Wong, C. P., Wood, L., Wood, M. H., Woody, C., Wyslouch, B., Xiao, Z., Yamazaki, Y., Yang, Y., Ye, Z., Yoo, H. D., Yurov, M., Zachariou, N., Zajc, W. A., Zha, W., Zhang, J. L., Zhang, J. X., Zhang, Y., Zhao, Y. X., Zheng, X. & Zhuang, P., Oct 2023, In: Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 1055, 168464.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    5 Scopus citations
  • Detector requirements and simulation results for the EIC exclusive, diffractive and tagging physics program using the ECCE detector concept

    Bylinkin, A., Dean, C. T., Fegan, S., Gangadharan, D., Gates, K., Kay, S. J. D., Korover, I., Li, W. B., Li, X., Montgomery, R., Nguyen, D., Penman, G., Pybus, J. R., Santiesteban, N., Shimizu, S., Trotta, R., Usman, A., Baker, M. D., Frantz, J., Glazier, D. I., & 259 othersHiginbotham, D. W., Horn, T., Huang, J., Huber, G. M., Reed, R., Roche, J., Schmidt, A., Steinberg, P., Stevens, J., Goto, Y., Munoz Camacho, C., Murray, M., Papandreou, Z., Zha, W., Adkins, J. K., Akiba, Y., Albataineh, A., Amaryan, M., Arsene, I. C., Ayerbe Gayoso, C., Bae, J., Bai, X., Bashkanov, M., Bellwied, R., Benmokhtar, F., Berdnikov, V., Bernauer, J. C., Bock, F., Boeglin, W., Borysova, M., Brash, E., Brindza, P., Briscoe, W. J., Brooks, M., Bueltmann, S., Bukhari, M. H. S., Capobianco, R., Chang, W. C., Cheon, Y., Chen, K., Chen, K. F., Cheng, K. Y., Chiu, M., Chujo, T., Citron, Z., Cline, E., Cohen, E., Cormier, T., Corrales Morales, Y., Cotton, C., Crafts, J., Crawford, C., Creekmore, S., Cuevas, C., Cunningham, J., David, G., Demarteau, M., Diehl, S., Doshita, N., Dupré, R., Durham, J. M., Dzhygadlo, R., Ehlers, R., El Fassi, L., Emmert, A., Ent, R., Fanelli, C., Fatemi, R., Finger, M., Friedman, M., Friscic, I., Gardner, S., Geurts, F., Gilman, R., Glimos, E., Grau, N., Greene, S. V., Guo, A. Q., Guo, L., Ha, S. K., Haggerty, J., Hayward, T., He, X., Hen, O., Hoballah, M., Hoghmrtsyan, A., Hsu, P. H. J., Hutson, A., Hwang, K. Y., Hyde, C. E., Inaba, M., Iwata, T., Jo, H. S., Joo, K., Kalantarians, N., Kalicy, G., Kawade, K., Kim, A., Kim, B., Kim, C., Kim, M., Kim, Y., Kistenev, E., Klimenko, V., Ko, S. H., Korsch, W., Krintiras, G., Kuhn, S., Kuo, C. M., Kutz, T., Lajoie, J., Lawrence, D., Lebedev, S., Lee, H., Lee, J. S. H., Lee, S. W., Lee, Y. J., Li, W., Liang, Y. T., Lim, S., Lin, C. H., Lin, D. X., Liu, K., Liu, M. X., Livingston, K., Liyanage, N., Llope, W. J., Loizides, C., Long, E., Lu, R. S., Lu, Z., Lynch, W., Mantry, S., Marchand, D., Marcisovsky, M., Markert, C., Markowitz, P., Marukyan, H., McGaughey, P., Mihovilovic, M., Milner, R. G., Milov, A., Miyachi, Y., Mkrtchyan, A., Monaghan, P., Morrison, D., Movsisyan, A., Mkrtchyan, H., Nagai, K., Nagle, J., Nakagawa, I., Nattrass, C., Niccolai, S., Nouicer, R., Nukazuka, G., Nycz, M., Okorokov, V. A., Orešić, S., Osborn, J. D., O'Shaughnessy, C., Paganis, S., Pate, S. F., Patel, M., Paus, C., Perdekamp, M. G., Perepelitsa, D. V., Periera da Costa, H., Peters, K., Phelps, W., Piasetzky, E., Pinkenburg, C., Prochazka, I., Protzman, T., Purschke, M. L., Putschke, J., Rajput-Ghoshal, R., Rasson, J., Raue, B., Read, K. F., Røed, K., Reinhold, J., Renner, E. L., Richards, J., Riedl, C., Rinn, T., Roland, G. M., Ron, G., Rosati, M., Royon, C., Ryu, J., Salur, S., Santos, R., Sarsour, M., Schambach, J., Schmidt, N., Schwarz, C., Schwiening, J., Seidl, R., Sickles, A., Simmerling, P., Sirca, S., Sharma, D., Shi, Z., Shibata, T. A., Shih, C. W., Shrestha, U., Slifer, K., Smith, K., Sokhan, D., Soltz, R., Sondheim, W., Song, J., Strakovsky, I. I., Stepanov, P., Strube, J., Sun, P., Sun, X., Suresh, K., Tadevosyan, V., Tang, W. C., Tapia Araya, S., Tarafdar, S., Teodorescu, L., Thomas, D., Timmins, A., Tomasek, L., Trotta, N., Tveter, T. S., Umaka, E., van Hecke, H. W., Van Hulse, C., Velkovska, J., Voutier, E., Wang, P. K., Wang, Q., Wang, Y., Watts, D. P., Wickramaarachchi, N., Weinstein, L., Williams, M., Wong, C. P., Wood, L., Wood, M. H., Woody, C., Wyslouch, B., Xiao, Z., Yamazaki, Y., Yang, Y., Ye, Z., Yoo, H. D., Yurov, M., Zachariou, N., Zajc, W. A., Zhang, J. L., Zhang, J. X., Zhang, Y., Zhao, Y. X., Zheng, X. & Zhuang, P., Jul 2023, In: Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 1052, 168238.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • ECCE unpolarized TMD measurements

    Seidl, R., Vladimirov, A., Adkins, J. K., Akiba, Y., Albataineh, A., Amaryan, M., Arsene, I. C., Gayoso, C. A., Bae, J., Bai, X., Baker, M. D., Bashkanov, M., Bellwied, R., Benmokhtar, F., Berdnikov, V., Bernauer, J. C., Bock, F., Boeglin, W., Borysova, M., Brash, E., & 260 othersBrindza, P., Briscoe, W. J., Brooks, M., Bueltmann, S., Bukhari, M. H. S., Bylinkin, A., Capobianco, R., Chang, W. C., Cheon, Y., Chen, K., Chen, K. F., Cheng, K. Y., Chiu, M., Chujo, T., Citron, Z., Cline, E., Cohen, E., Cormier, T., Morales, Y. C., Cotton, C., Crafts, J., Crawford, C., Creekmore, S., Cuevas, C., Cunningham, J., David, G., Dean, C. T., Demarteau, M., Diehl, S., Doshita, N., Dupré, R., Durham, J. M., Dzhygadlo, R., Ehlers, R., Fassi, L. E., Emmert, A., Ent, R., Fanelli, C., Fatemi, R., Fegan, S., Finger, M., Frantz, J., Friedman, M., Friscic, I., Gangadharan, D., Gardner, S., Gates, K., Geurts, F., Gilman, R., Glazier, D., Glimos, E., Goto, Y., Grau, N., Greene, S. V., Guo, A. Q., Guo, L., Ha, S. K., Haggerty, J., Hayward, T., He, X., Hen, O., Higinbotham, D. W., Hoballah, M., Horn, T., Hoghmrtsyan, A., Hsu, P. H. J., Huang, J., Huber, G., Hutson, A., Hwang, K. Y., Hyde, C. E., Inaba, M., Iwata, T., Jo, H. S., Joo, K., Kalantarians, N., Kalicy, G., Kawade, K., Kay, S. J. D., Kim, A., Kim, B., Kim, C., Kim, M., Kim, Y., Kistenev, E., Klimenko, V., Ko, S. H., Korover, I., Korsch, W., Krintiras, G., Kuhn, S., Kuo, C. M., Kutz, T., Lajoie, J., Lawrence, D., Lebedev, S., Lee, H., Lee, J. S. H., Lee, S. W., Lee, Y. J., Li, W., Li, W. B., Li, X., Liang, Y. T., Lim, S., Lin, C. H., Lin, D. X., Liu, K., Liu, M. X., Livingston, K., Liyanage, N., Llope, W. J., Loizides, C., Long, E., Lu, R. S., Lu, Z., Lynch, W., Mantry, S., Marchand, D., Marcisovsky, M., Markert, C., Markowitz, P., Marukyan, H., McGaughey, P., Mihovilovic, M., Milner, R. G., Milov, A., Miyachi, Y., Mkrtchyan, A., Monaghan, P., Montgomery, R., Morrison, D., Movsisyan, A., Mkrtchyan, H., Camacho, C. M., Murray, M., Nagai, K., Nagle, J., Nakagawa, I., Nattrass, C., Nguyen, D., Niccolai, S., Nouicer, R., Nukazuka, G., Nycz, M., Okorokov, V. A., Orešić, S., Osborn, J. D., O'Shaughnessy, C., Paganis, S., Papandreou, Z., Pate, S. F., Patel, M., Paus, C., Penman, G., Perdekamp, M. G., Perepelitsa, D. V., da Costa, H. P., Peters, K., Phelps, W., Piasetzky, E., Pinkenburg, C., Prochazka, I., Protzman, T., Purschke, M. L., Putschke, J., Pybus, J. R., Rajput-Ghoshal, R., Rasson, J., Raue, B., Read, K. F., Røed, K., Reed, R., Reinhold, J., Renner, E. L., Richards, J., Riedl, C., Rinn, T., Roche, J., Roland, G. M., Ron, G., Rosati, M., Royon, C., Ryu, J., Salur, S., Santiesteban, N., Santos, R., Sarsour, M., Schambach, J., Schmidt, A., Schmidt, N., Schwarz, C., Schwiening, J., Sickles, A., Simmerling, P., Sirca, S., Sharma, D., Shi, Z., Shibata, T. A., Shih, C. W., Shimizu, S., Shrestha, U., Slifer, K., Smith, K., Sokhan, D., Soltz, R., Sondheim, W., Song, J., Strakovsky, I. I., Steinberg, P., Stepanov, P., Stevens, J., Strube, J., Sun, P., Sun, X., Suresh, K., Tadevosyan, V., Tang, W. C., Araya, S. T., Tarafdar, S., Teodorescu, L., Thomas, D., Timmins, A., Tomasek, L., Trotta, N., Trotta, R., Tveter, T. S., Umaka, E., Usman, A., van Hecke, H. W., Hulse, C. V., Velkovska, J., Voutier, E., Wang, P. K., Wang, Q., Wang, Y., Watts, D. P., Wickramaarachchi, N., Weinstein, L., Williams, M., Wong, C. P., Wood, L., Wood, M. H., Woody, C., Wyslouch, B., Xiao, Z., Yamazaki, Y., Yang, Y., Ye, Z., Yoo, H. D., Yurov, M., Zachariou, N., Zajc, W. A., Zha, W., Zhang, J. L., Zhang, J. X., Zhang, Y., Zhao, Y. X., Zheng, X. & Zhuang, P., Oct 2023, In: Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 1055, 168458.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
  • Egg reappearance periods of anthelmintics against equine cyathostomins: The state of play revisited

    Macdonald, S. L., Abbas, G., Ghafar, A., Gauci, C. G., Bauquier, J., El-Hage, C., Tennent-Brown, B., Wilkes, E. J. A., Beasley, A., Jacobson, C., Cudmore, L., Carrigan, P., Hurley, J., Beveridge, I., Hughes, K. J., Nielsen, M. K. & Jabbar, A., Apr 2023, In: International Journal for Parasitology: Drugs and Drug Resistance. 21, p. 28-39 12 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    14 Scopus citations
  • Evaluation of longitudinal double-spin asymmetry measurements in semi-inclusive deep-inelastic scattering from the proton for the ECCE detector design

    Van Hulse, C., Adkins, J. K., Akiba, Y., Albataineh, A., Amaryan, M., Arsene, I. C., Gayoso, C. A., Bae, J., Bai, X., Baker, M. D., Bashkanov, M., Bellwied, R., Benmokhtar, F., Berdnikov, V., Bernauer, J. C., Bock, F., Boeglin, W., Borysova, M., Brash, E., Brindza, P., & 258 othersBriscoe, W. J., Brooks, M., Bueltmann, S., Bukhari, M. H. S., Bylinkin, A., Capobianco, R., Chang, W. C., Cheon, Y., Chen, K., Chen, K. F., Cheng, K. Y., Chiu, M., Chujo, T., Citron, Z., Cline, E., Cohen, E., Cormier, T., Morales, Y. C., Cotton, C., Crafts, J., Crawford, C., Creekmore, S., C.Cuevas, Cunningham, J., David, G., Dean, C. T., Demarteau, M., Diehl, S., Doshita, N., Dupré, R., Durham, J. M., Dzhygadlo, R., Ehlers, R., Fassi, L. E., Emmert, A., Ent, R., Fanelli, C., Fatemi, R., Fegan, S., Finger, M., Frantz, J., Friedman, M., Friscic, I., Gangadharan, D., Gardner, S., Gates, K., Geurts, F., Gilman, R., Glazier, D., Glimos, E., Goto, Y., Grau, N., Greene, S. V., Guo, A. Q., Guo, L., Ha, S. K., Haggerty, J., Hayward, T., He, X., Hen, O., Higinbotham, D. W., Hoballah, M., Horn, T., Hoghmrtsyan, A., Hsu, P. H. J., Huang, J., Huber, G., Hutson, A., Hwang, K. Y., Hyde, C. E., Inaba, M., Iwata, T., Jo, H. S., Joo, K., Kalantarians, N., Kalicy, G., Kawade, K., Kay, S. J. D., Kim, A., Kim, B., Kim, C., Kim, M., Kim, Y., Kistenev, E., Klimenko, V., Ko, S. H., Korover, I., Korsch, W., Krintiras, G., Kuhn, S., Kuo, C. M., Kutz, T., Lajoie, J., Lawrence, D., Lebedev, S., Lee, H., Lee, J. S. H., Lee, S. W., Lee, Y. J., Li, W., Li, W. B., Li, X., Liang, Y. T., Lim, S., Lin, C. H., Lin, D. X., Liu, K., Liu, M. X., Livingston, K., Liyanage, N., Llope, W. J., Loizides, C., Long, E., Lu, R. S., Lu, Z., Lynch, W., Mantry, S., Marchand, D., Marcisovsky, M., Markert, C., Markowitz, P., Marukyan, H., McGaughey, P., Mihovilovic, M., Milner, R. G., Milov, A., Miyachi, Y., Mkrtchyan, A., Mkrtchyan, H., Monaghan, P., Montgomery, R., Morrison, D., Movsisyan, A., Camacho, C. M., Murray, M., Nagai, K., Nagle, J., Nakagawa, I., Nattrass, C., Nguyen, D., Niccolai, S., Nouicer, R., Nukazuka, G., Nycz, M., Okorokov, V. A., Orešić, S., Osborn, J. D., O'Shaughnessy, C., Paganis, S., Papandreou, Z., Pate, S. F., Patel, M., Paus, C., Penman, G., Perdekamp, M. G., Perepelitsa, D. V., Costa, H. P. D., Peters, K., Phelps, W., Piasetzky, E., Pinkenburg, C., Prochazka, I., Protzman, T., Purschke, M. L., Putschke, J., Pybus, J. R., Rajput-Ghoshal, R., Rasson, J., Read, K. F., Røed, K., Reed, R., Reinhold, J., Renner, E. L., Richards, J., Riedl, C., Rinn, T., Roche, J., Roland, G. M., Ron, G., Rosati, M., Royon, C., Ryu, J., Salur, S., Santiesteban, N., Santos, R., Sarsour, M., Schambach, J., Schmidt, A., Schmidt, N., Schwarz, C., Schwiening, J., Seidl, R., Sickles, A., Simmerling, P., Sirca, S., Sharma, D., Shi, Z., Shibata, T. A., Shih, C. W., Shimizu, S., Shrestha, U., Slifer, K., Smith, K., Sokhan, D., Soltz, R., Sondheim, W., Song, J., Strakovsky, I. I., Steinberg, P., Stepanov, P., Stevens, J., Strube, J., Sun, P., Sun, X., Suresh, K., Tadevosyan, V., Tang, W. C., Araya, S. T., Tarafdar, S., Teodorescu, L., Thomas, D., Timmins, A., Tomasek, L., Trotta, N., Trotta, R., Tveter, T. S., Umaka, E., Usman, A., Hecke, H. W. V., Velkovska, J., Voutier, E., Wang, P. K., Wang, Q., Wang, Y., Watts, D. P., Wickramaarachchi, N., Weinstein, L., Williams, M., Wong, C. P., Wood, L., Wood, M. H., Woody, C., Wyslouch, B., Xiao, Z., Yamazaki, Y., Yang, Y., Ye, Z., Yoo, H. D., Yurov, M., Zachariou, N., Zajc, W. A., Zha, W., Zhang, J. L., Zhang, J. X., Zhang, Y., Zhao, Y. X., Zheng, X. & Zhuang, P., Nov 2023, In: Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 1056, 168563.

    Research output: Contribution to journalReview articlepeer-review

    1 Scopus citations
  • Evolutionarily stable strategy analysis and its links to demography and genetics through invasion fitness

    Van Cleve, J., May 8 2023, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 378, 1876, 20210496.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    5 Scopus citations
  • Functional annotation of the animal genomes: An integrated annotation resource for the horse

    Peng, S., Dahlgren, A. R., Donnelly, C. G., Hales, E. N., Petersen, J. L., Bellone, R. R., Kalbfleisch, T. & Finno, C. J., Mar 1 2023, In: PLoS Genetics. 19, 3, p. e1010468

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Hepatic insulin receptor: new views on the mechanisms of liver disease

    Lee, W. H., Najjar, S. M., Kahn, C. R. & Hinds, T. D., Aug 2023, In: Metabolism: Clinical and Experimental. 145, 155607.

    Research output: Contribution to journalReview articlepeer-review

    10 Scopus citations
  • Insights into Surface Ion-imprinted Materials for Heavy Metal Ion Treatment: Challenges and Opportunities

    Ding, C., Deng, Y., Merchant, A., Su, J., Zeng, G., Long, X., Zhong, M. E., Yang, L., Gong, D., Bai, L., Zhou, X. & Liu, X., 2023, In: Separation and Purification Reviews. 52, 2, p. 123-134 12 p.

    Research output: Contribution to journalReview articlepeer-review

    6 Scopus citations
  • Integrating pharmacogenomic testing into paired germline and somatic genomic testing in patients with cancer

    Seligson, N. D., Kolesar, J. M., Alam, B., Baker, L., Lamba, J. K., Fridley, B. L., Salahudeen, A. A., Hertz, D. L. & Hicks, J. K., Aug 1 2023, In: Pharmacogenomics. 24, 13, p. 731-738 8 p.

    Research output: Contribution to journalReview articlepeer-review

    2 Scopus citations
  • Light regulation of the biosynthesis of phenolics, terpenoids, and alkaloids in plants

    Liu, Y., Singh, S. K., Pattanaik, S., Wang, H. & Yuan, L., Oct 18 2023, In: Communications Biology. 6, 1, p. 1055

    Research output: Contribution to journalReview articlepeer-review

    3 Scopus citations
  • Macrophage Repolarization as a Therapeutic Strategy for Osteosarcoma

    Anand, N., Peh, K. H. & Kolesar, J. M., Feb 2023, In: International Journal of Molecular Sciences. 24, 3, 2858.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    11 Scopus citations
  • Mechanisms Linking Metabolic-Associated Fatty Liver Disease (MAFLD) to Cardiovascular Disease

    Badmus, O. O., Hinds, T. D. & Stec, D. E., Aug 2023, In: Current Hypertension Reports. 25, 8, p. 151-162 12 p.

    Research output: Contribution to journalReview articlepeer-review

    9 Scopus citations
  • Mechanisms of mechanical overload-induced skeletal muscle hypertrophy: current understanding and future directions

    Roberts, M. D., McCarthy, J. J., Hornberger, T. A., Phillips, S. M., Mackey, A. L., Nader, G. A., Boppart, M. D., Kavazis, A. N., Reidy, P. T., Ogasawara, R., Libardi, C. A., Ugrinowitsch, C., Booth, F. W. & Esser, K. A., Oct 1 2023, In: Physiological Reviews. 103, 4, p. 2679-2757 79 p.

    Research output: Contribution to journalReview articlepeer-review

    16 Scopus citations
  • Mitochondria as a target of third row transition metal-based anticancer complexes

    Olelewe, C. & Awuah, S. G., Feb 2023, In: Current Opinion in Chemical Biology. 72, 102235.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    15 Scopus citations
  • Molecular diagnostics for gastrointestinal helminths in equids: Past, present and future

    Ghafar, A., Abbas, G., Beasley, A., Bauquier, J., Wilkes, E. J. A., Jacobson, C., McConnell, E., El-Hage, C., Carrigan, P., Cudmore, L., Tennent-Brown, B., Hurley, J., Nielsen, M. K., Gauci, C. G., Beveridge, I., Hughes, K. J. & Jabbar, A., Jan 2023, In: Veterinary Parasitology. 313, 109851.

    Research output: Contribution to journalReview articlepeer-review

    5 Scopus citations
  • Molecular Mechanisms of Winter Survival

    Teets, N. M., Marshall, K. E. & Reynolds, J. A., Jan 23 2023, In: Annual Review of Entomology. 68, p. 319-339 21 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    14 Scopus citations
  • Next Generation Gold Drugs and Probes: Chemistry and Biomedical Applications

    Mertens, R. T., Gukathasan, S., Arojojoye, A. S., Olelewe, C. & Awuah, S. G., May 24 2023, In: Chemical Reviews. 123, 10, p. 6612-6667 56 p.

    Research output: Contribution to journalReview articlepeer-review

    26 Scopus citations
  • Particle physics at the European Spallation Source

    Abele, H., Alekou, A., Algora, A., Andersen, K., Baeßler, S., Barron-Pálos, L., Barrow, J., Baussan, E., Bentley, P., Berezhiani, Z., Beßler, Y., Bhattacharyya, A. K., Bianchi, A., Bijnens, J., Blanco, C., Kraljevic, N. B., Blennow, M., Bodek, K., Bogomilov, M., Bohm, C., & 159 othersBolling, B., Bouquerel, E., Brooijmans, G., Broussard, L. J., Buchan, O., Burgman, A., Calén, H., Carlile, C. J., Cederkall, J., Chanel, E., Christiansen, P., Cirigliano, V., Collar, J. I., Collins, M., Crawford, C. B., Morales, E. C., Cupiał, P., D'Alessi, L., Damian, J. I. M., Danared, H., Dancila, D., de André, J. P. A. M., Delahaye, J. P., Degenkolb, S., Di Julio, D. D., Dracos, M., Dunne, K., Efthymiopoulos, I., Ekelöf, T., Eklund, L., Eshraqi, M., Esteban, I., Fanourakis, G., Farricker, A., Fernandez-Martinez, E., Ferreira, M. J., Fertl, M., Fierlinger, P., Folsom, B., Frank, A., Fratangelo, A., Friman-Gayer, U., Fukuda, T., Fynbo, H. O. U., Sosa, A. G., Gazis, N., Gålnander, B., Geralis, T., Ghosh, M., Gokbulut, G., Gomez-Cadenas, J. J., Gonzalez-Alonso, M., Gonzalez, F., Halić, L., Happe, C., Heil, P., Heinz, A., Herde, H., Holl, M., Jenke, T., Jenssen, M., Jericha, E., Johansson, H. T., Johansson, R., Johansson, T., Kamyshkov, Y., Topaksu, A. K., Kildetoft, B., Kirch, K., Kliček, B., Klinkby, E., Kolevatov, R., Konrad, G., Kozioł, M., Krhač, K., Kupść, A., Łacny, Larizgoitia, L., Lewis, C. M., Lindroos, M., Lychagin, E., Lytken, E., Maiano, C., Marciniewski, P., Markaj, G., Märkisch, B., Marrelli, C., Martins, C., Meirose, B., Mezzetto, M., Milas, N., Milstead, D., Monrabal, F., Muhrer, G., Nepomuceno, A., Nesvizhevsky, V., Nilsson, T., Novella, P., Oglakci, M., Ohlsson, T., Olvegård, M., Oskarsson, A., Ota, T., Park, J., Patrzalek, D., Perrey, H., Persoz, M., Petkov, G., Piegsa, F. M., Pistillo, C., Poussot, P., Privitera, P., Rataj, B., Ries, D., Rizzi, N., Rosauro-Alcaraz, S., Rozpedzik, D., Saiang, D., Santoro, V., Schmidt, U., Schober, H., Schulthess, I., Silverstein, S., Simón, A., Sina, H., Snamina, J., Snow, W. M., Soldner, T., Stavropoulos, G., Stipčević, M., Szybiński, B., Takibayev, A., Tang, Z., Tarkeshian, R., Theroine, C., Thorne, J., Terranova, F., Thomas, J., Tolba, T., Torres-Sánchez, P., Trachanas, E., Tsenov, R., Uggerhøj, U. I., Vankova-Kirilova, G., Vassilopoulos, N., Wagner, R., Wang, X., Wildner, E., Wolke, M., Wurtz, J., Yiu, S. C., Yoon, S. G., Young, A. R., Zanini, L., Zejma, J., Zerzion, D., Zimmer, O., Zormpa, O. & Zou, Y., Jun 15 2023, In: Physics Reports. 1023, p. 1-84 84 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    8 Scopus citations
  • RNAi turns 25:contributions and challenges in insect science

    Palli, S. R., 2023, In: Frontiers in Insect Science. 3, 1209478.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • Search for e→τ charged lepton flavor violation at the EIC with the ECCE detector

    Zhang, J. L., Mantry, S., Adkins, J. K., Akiba, Y., Albataineh, A., Amaryan, M., Arsene, I. C., Gayoso, C. A., Bae, J., Bai, X., Baker, M. D., Bashkanov, M., Bellwied, R., Benmokhtar, F., Berdnikov, V., Bernauer, J. C., Bock, F., Boeglin, W., Borysova, M., Brash, E., & 259 othersBrindza, P., Briscoe, W. J., Brooks, M., Bueltmann, S., Bukhari, M. H. S., Bylinkin, A., Capobianco, R., Chang, W. C., Cheon, Y., Chen, K., Chen, K. F., Cheng, K. Y., Chiu, M., Chujo, T., Citron, Z., Cline, E., Cohen, E., Cormier, T., Corrales Morales, Y., Cotton, C., Crafts, J., Crawford, C., Creekmore, S., Cuevas, C., Cunningham, J., David, G., Dean, C. T., Demarteau, M., Diehl, S., Doshita, N., Dupré, R., Durham, J. M., Dzhygadlo, R., Ehlers, R., El Fassi, L., Emmert, A., Ent, R., Fanelli, C., Fatemi, R., Fegan, S., Finger, M., Frantz, J., Friedman, M., Friscic, I., Gangadharan, D., Gardner, S., Gates, K., Geurts, F., Gilman, R., Glazier, D., Glimos, E., Goto, Y., Grau, N., Greene, S. V., Guo, A. Q., Guo, L., Ha, S. K., Haggerty, J., Hayward, T., He, X., Hen, O., Higinbotham, D. W., Hoballah, M., Horn, T., Hoghmrtsyan, A., Hsu, P. H. J., Huang, J., Huber, G., Hutson, A., Hwang, K. Y., Hyde, C. E., Inaba, M., Iwata, T., Jo, H. S., Joo, K., Kalantarians, N., Kalicy, G., Kawade, K., Kay, S. J. D., Kim, A., Kim, B., Kim, C., Kim, M., Kim, Y., Kistenev, E., Klimenko, V., Ko, S. H., Korover, I., Korsch, W., Krintiras, G., Kuhn, S., Kuo, C. M., Kutz, T., Lajoie, J., Lawrence, D., Lebedev, S., Lee, H., Lee, J. S. H., Lee, S. W., Lee, Y. J., Li, W., Li, W. B., Li, X., Liang, Y. T., Lim, S., Lin, C. H., Lin, D. X., Liu, K., Liu, M. X., Livingston, K., Liyanage, N., Llope, W. J., Loizides, C., Long, E., Lu, R. S., Lu, Z., Lynch, W., Marchand, D., Marcisovsky, M., Markert, C., Markowitz, P., Marukyan, H., McGaughey, P., Mihovilovic, M., Milner, R. G., Milov, A., Miyachi, Y., Mkrtchyan, A., Mkrtchyan, H., Monaghan, P., Montgomery, R., Morrison, D., Movsisyan, A., Munoz Camacho, C., Murray, M., Nagai, K., Nagle, J., Nakagawa, I., Nattrass, C., Nguyen, D., Niccolai, S., Nouicer, R., Nukazuka, G., Nycz, M., Okorokov, V. A., Orešić, S., Osborn, J. D., O'Shaughnessy, C., Paganis, S., Papandreou, Z., Pate, S. F., Patel, M., Paus, C., Penman, G., Perdekamp, M. G., Perepelitsa, D. V., Periera da Costa, H., Peters, K., Phelps, W., Piasetzky, E., Pinkenburg, C., Prochazka, I., Protzman, T., Purschke, M. L., Putschke, J., Pybus, J. R., Rajput-Ghoshal, R., Rasson, J., Raue, B., Read, K. F., Røed, K., Reed, R., Reinhold, J., Renner, E. L., Richards, J., Riedl, C., Rinn, T., Roche, J., Roland, G. M., Ron, G., Rosati, M., Royon, C., Ryu, J., Salur, S., Santiesteban, N., Santos, R., Sarsour, M., Schambach, J., Schmidt, A., Schmidt, N., Schwarz, C., Schwiening, J., Seidl, R., Sickles, A., Simmerling, P., Sirca, S., Sharma, D., Shi, Z., Shibata, T. A., Shih, C. W., Shimizu, S., Shrestha, U., Slifer, K., Smith, K., Sokhan, D., Soltz, R., Sondheim, W., Song, J., Strakovsky, I. I., Steinberg, P., Stepanov, P., Stevens, J., Strube, J., Sun, P., Sun, X., Suresh, K., Tadevosyan, V., Tang, W. C., Tapia Araya, S., Tarafdar, S., Teodorescu, L., Thomas, D., Timmins, A., Tomasek, L., Trotta, N., Trotta, R., Tveter, T. S., Umaka, E., Usman, A., van Hecke, H. W., Van Hulse, C., Velkovska, J., Voutier, E., Wang, P. K., Wang, Q., Wang, Y., Watts, D. P., Wickramaarachchi, N., Weinstein, L., Williams, M., Wong, C. P., Wood, L., Wood, M. H., Woody, C., Wyslouch, B., Xiao, Z., Yamazaki, Y., Yang, Y., Ye, Z., Yoo, H. D., Yurov, M., Zachariou, N., Zajc, W. A., Zha, W., Zhang, J. X., Zhang, Y., Zhao, Y. X., Zheng, X. & Zhuang, P., Aug 2023, In: Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 1053, 168276.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Staying Ahead of the Game: How SARS-CoV-2 has Accelerated the Application of Machine Learning in Pandemic Management

    Williams, A. H. & Zhan, C. G., Sep 2023, In: BioDrugs. 37, 5, p. 649-674 26 p.

    Research output: Contribution to journalReview articlepeer-review

    1 Scopus citations
  • Symmetry-structured convolutional neural networks

    Maduranga, K. D. G., Zadorozhnyy, V. & Ye, Q., Feb 2023, In: Neural Computing and Applications. 35, 6, p. 4421-4434 14 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    2 Scopus citations
  • Targeting receptor tyrosine kinases in ovarian cancer: Genomic dysregulation, clinical evaluation of inhibitors, and potential for combinatorial therapies

    Wei, Y., Erfani, S., Schweer, D., de Gouvea, R., Qadir, J., Shi, J., Cheng, K., Wu, D., Craven, R., Wu, Y., Olivier, T., Baldwin, L. A., Zhou, B., Zhou, Y., Zhao, W., Yang, B. B., Ueland, F. R. & Yang, X. H., Mar 16 2023, In: Molecular Therapy Oncolytics. 28, p. 293-306 14 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    4 Scopus citations
  • The avian taste system

    Niknafs, S., Navarro, M., Schneider, E. R. & Roura, E., 2023, In: Frontiers in Physiology. 14, 1235377.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    1 Scopus citations
  • The myonuclear domain in adult skeletal muscle fibres: past, present and future

    Bagley, J. R., Denes, L. T., McCarthy, J. J., Wang, E. T. & Murach, K. A., Feb 15 2023, In: Journal of Physiology. 601, 4, p. 723-741 19 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    7 Scopus citations
  • The physiology of bilirubin: health and disease equilibrium

    Vitek, L., Hinds, T. D., Stec, D. E. & Tiribelli, C., Apr 2023, In: Trends in Molecular Medicine. 29, 4, p. 315-328 14 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    27 Scopus citations
  • Utilization of Engineering Advances for Detailed Biomechanical Characterization of the Mitral–Ventricular Relationship to Optimize Repair Strategies: A Comprehensive Review

    van Kampen, A., Morningstar, J. E., Goudot, G., Ingels, N., Wenk, J. F., Nagata, Y., Yaghoubian, K. M., Norris, R. A., Borger, M. A., Melnitchouk, S., Levine, R. A. & Jensen, M. O., May 2023, In: Bioengineering. 10, 5, 601.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
  • World Association for the Advancement of Veterinary Parasitology (W.A.A.V.P.) guideline for diagnosing anthelmintic resistance using the faecal egg count reduction test in ruminants, horses and swine

    Kaplan, R. M., Denwood, M. J., Nielsen, M. K., Thamsborg, S. M., Torgerson, P. R., Gilleard, J. S., Dobson, R. J., Vercruysse, J. & Levecke, B., Jun 2023, In: Veterinary Parasitology. 318, 109936.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    38 Scopus citations
  • 2022

    Anthelmintic resistance in equine nematodes: Current status and emerging trends

    Nielsen, M. K., Dec 2022, In: International Journal for Parasitology: Drugs and Drug Resistance. 20, p. 76-88 13 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    44 Scopus citations
  • A Review on Differential Abundance Analysis Methods for Mass Spectrometry-Based Metabolomic Data

    Huang, Z. & Wang, C., Apr 2022, In: Metabolites. 12, 4, 305.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    3 Scopus citations
  • Bet-hedging in innate and adaptive immune systems

    Tate, A. T. & Van Cleve, J., 2022, In: Evolution, Medicine and Public Health. 10, 1, p. 256-265 10 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    1 Scopus citations
  • Challenges in Information-Mining the Materials Literature: A Case Study and Perspective

    Smith, A., Bhat, V., Ai, Q. & Risko, C., Jun 14 2022, In: Chemistry of Materials. 34, 11, p. 4821-4827 7 p.

    Research output: Contribution to journalReview articlepeer-review

    4 Scopus citations
  • Data storage architectures to accelerate chemical discovery: data accessibility for individual laboratories and the community

    Duke, R., Bhat, V. & Risko, C., Nov 8 2022, In: Chemical Science. 13, 46, p. 13646-13656 11 p.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    8 Scopus citations
  • Development of pharmacotherapies for abdominal aortic aneurysms

    Weaver, L. M., Loftin, C. D. & Zhan, C. G., Sep 2022, In: Biomedicine and Pharmacotherapy. 153, 113340.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    8 Scopus citations
  • Equine Protozoal Myeloencephalitis

    MacKay, R. J. & Howe, D. K., Aug 2022, In: Veterinary Clinics of North America - Equine Practice. 38, 2, p. 249-268 20 p.

    Research output: Contribution to journalReview articlepeer-review

    4 Scopus citations
  • Extraskeletal osteosarcoma and its histological mimics

    Yenwongfai, L. N., Liu, J., Wang, C. & Bocklage, T. J., Jun 2022, In: Human Pathology Reports. 28, 300639.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    3 Scopus citations
  • Eyes on CHARGE syndrome: Roles of CHD7 in ocular development

    Krueger, L. A. & Morris, A. C., Sep 8 2022, In: Frontiers in Cell and Developmental Biology. 10, 994412.

    Research output: Contribution to journalReview articlepeer-review

    Open Access
    6 Scopus citations
  • Facial Recognition Software Use on Surgically Altered Faces: A Systematic Review

    Gupta, N., Hughes, S. J., Chirwa, R. & Cheng, Q., Nov 1 2022, In: Journal of Craniofacial Surgery. 33, 8, p. 2443-2446 4 p.

    Research output: Contribution to journalReview articlepeer-review

  • Genetics of Thoroughbred Racehorse Performance

    Bailey, E., Petersen, J. L. & Kalbfleisch, T. S., Feb 2022, In: Annual Review of Animal Biosciences. 10, p. 131-150 20 p.

    Research output: Contribution to journalReview articlepeer-review

    8 Scopus citations