Kentucky Tobacco Research and Development Center (KTRDC)

2015

Small tandem target mimic-mediated blockage of microRNA858 induces anthocyanin accumulation in tomato

Jia, X., Shen, J., Liu, H., Li, F., Ding, N., Gao, C., Pattanaik, S., Patra, B., Li, R. & Yuan, L., Jul 2015, In: Planta. 242, 1, p. 283-93 11 p.

Research output: Contribution to journal › Article › peer-review

Small tandem target mimic-mediated blockage of microRNA858 induces anthocyanin accumulation in tomato

Jia, X., Shen, J., Liu, H., Li, F., Ding, N., Gao, C., Pattanaik, S., Patra, B., Li, R. & Yuan, L., Jul 28 2015, In: Planta. 242, 1, p. 283-293 11 p.

Research output: Contribution to journal › Article › peer-review

148 Scopus citations

2014

Analyses of Catharanthus Roseus and Arabidopsis Thaliana WRKY Transcription Factors Reveal Involvement in Jasmonate Signaling

Schluttenhofer, C., Pattanaik, S., Patra, B. & Yuan, L., Jun 20 2014, In: BMC Genomics. 15, 1, p. 502 502.

Research output: Contribution to journal › Article › peer-review

Open Access

File

92 Scopus citations

15 Downloads (Pure)

An Overview of the Gene Regulatory Network Controlling Trichome Development in the Model Plant, Arabidopsis

Pattanaik, S., Patra, B., Singh, S. K. & Yuan, L., Jun 5 2014, In: Frontiers in Plant Science. 5, JUN, p. 259

Research output: Contribution to journal › Article

Open Access

File

200 Scopus citations

7 Downloads (Pure)

Directed evolution of GH43 β-xylosidase XylBH43 thermal stability and L186 saturation mutagenesis

Singh, S. K., Heng, C., Braker, J. D., Chan, V. J., Lee, C. C., Jordan, D. B., Yuan, L. & Wagschal, K., Mar 2014, In: Journal of Industrial Microbiology and Biotechnology. 41, 3, p. 489-498 10 p.

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Efficient chimeric plant promoters derived from plant infecting viral promoter sequences

Acharya, S., Ranjan, R., Pattanaik, S., Maiti, I. B. & Dey, N., Feb 2014, In: Planta. 239, 2, p. 381-96 16 p.

Research output: Contribution to journal › Article › peer-review

33 Scopus citations

2013

A R2R3-MYB Transcription Factor from Epimedium sagittatum Regulates the Flavonoid Biosynthetic Pathway

Huang, W., Lv, H., Wang, Y., Sun, W., Luo, M., Zeng, S., Pattanaik, S. & Yuan, L., Aug 1 2013, In: Plant and Soil Sciences Faculty Publications.

Research output: Contribution to journal › Article

File

14 Downloads (Pure)

A R2R3-MYB Transcription Factor from Epimedium sagittatum Regulates the Flavonoid Biosynthetic Pathway

Huang, W., Sun, W., Lv, H., Luo, M., Zeng, S., Pattanaik, S., Yuan, L. & Wang, Y., Aug 1 2013, In: PLoS ONE. 8, 8, e70778.

Research output: Contribution to journal › Article › peer-review

Open Access

71 Scopus citations

Promoter analysis reveals cis-regulatory motifs associated with the expression of the WRKY transcription factor CrWRKY1 in Catharanthus roseus

Yang, Z., Patra, B., Li, R., Pattanaik, S. & Yuan, L., Dec 2013, In: Planta. 238, 6, p. 1039-1049 11 p.

Research output: Contribution to journal › Article › peer-review

34 Scopus citations

Promoter analysis reveals cis-regulatory motifs associated with the expression of the WRKY transcription factor CrWRKY1 in Catharanthus roseus

Yang, Z., Patra, B., Li, R., Pattanaik, S. & Yuan, L., Dec 2013, In: Planta. 238, 6, p. 1039-49 11 p.

Research output: Contribution to journal › Article › peer-review

Proteolytic degradation of the flavonoid regulators, TRANSPARENT TESTA8 and TRANSPARENT TESTA GLABRA1, in Arabidopsis is mediated by the ubiquitin/26sproteasome system

Patra, B., Pattanaik, S. & Yuan, L., Oct 2013, In: Plant Signaling and Behavior. 8, 10

Research output: Contribution to journal › Article › peer-review

Open Access

18 Scopus citations

Proteolytic degradation of the flavonoid regulators, TRANSPARENT TESTA8 and TRANSPARENT TESTA GLABRA1, in Arabidopsis is mediated by the ubiquitin/26Sproteasome system

Patra, B., Pattanaik, S. & Yuan, L., Oct 2013, In: Plant Signaling and Behavior. 8, 10, p. doi: 10.4161/psb.25901

Research output: Contribution to journal › Article › peer-review

Transcriptional regulation of secondary metabolite biosynthesis in plants

Patra, B., Schluttenhofer, C., Wu, Y., Pattanaik, S. & Yuan, L., Nov 2013, In: Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1829, 11, p. 1236-1247 12 p.

Research output: Contribution to journal › Review article › peer-review

262 Scopus citations

Transcriptional regulation of secondary metabolite biosynthesis in plants

Patra, B., Schluttenhofer, C., Wu, Y., Pattanaik, S. & Yuan, L., Nov 2013, In: Biochimica et biophysica acta. 1829, 11, p. 1236-47 12 p.

Research output: Contribution to journal › Review article › peer-review

Ubiquitin protein ligase 3 mediates the proteasomal degradation of GLABROUS 3 and ENHANCER of GLABROUS 3, regulators of trichome development and flavonoid biosynthesis in Arabidopsis

Patra, B., Pattanaik, S. & Yuan, L., May 2013, In: Plant Journal. 74, 3, p. 435-447 13 p.

Research output: Contribution to journal › Article › peer-review

81 Scopus citations

Ubiquitin protein ligase 3 mediates the proteasomal degradation of GLABROUS 3 and ENHANCER OF GLABROUS 3, regulators of trichome development and flavonoid biosynthesis in Arabidopsis

Patra, B., Pattanaik, S. & Yuan, L., May 2013, In: Plant Journal. 74, 3, p. 435-47 13 p.

Research output: Contribution to journal › Article › peer-review

Variation of epimedins A - C and icariin in ten representative populations of epimedium brevicornu maxim., and implications for utilization

Xu, Y., Li, Z., Yuan, L., Zhang, X., Lu, D., Huang, H. & Wang, Y., Apr 2013, In: Chemistry and Biodiversity. 10, 4, p. 711-721 11 p.

Research output: Contribution to journal › Article › peer-review

30 Scopus citations

2012

Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R

Kong, Q., Pattanaik, S., Feller, A., Werkman, J. R., Chai, C., Wang, Y., Grotewold, E. & Yuan, L., Jul 24 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 30, p. E2091-7

Research output: Contribution to journal › Article › peer-review

Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R

Kong, Q., Pattanaik, S., Feller, A., Werkman, J. R., Chai, C., Wang, Y., Grotewold, E. & Yuan, L., Jul 24 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 30, p. E2091-E2097

Research output: Contribution to journal › Article › peer-review

Open Access

87 Scopus citations

2011

Bimolecular fluorescence complementation as a tool to study interactions of regulatory proteins in plant protoplasts

Pattanaik, S., Werkman, J. R. & Yuan, L., 2011, In: Methods in Molecular Biology. 754, p. 185-93 9 p.

Research output: Contribution to journal › Article › peer-review

Bimolecular Fluorescence Complementation as a Tool to Study Interactions of Regulatory Proteins in Plant Protoplasts

Pattanaik, S., Werkman, J. R. & Yuan, L., 2011, Plant Transcription Factors: Methods and Protocols. p. 185-193 9 p. (Methods in Molecular Biology; vol. 754).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

6 Scopus citations

Directed evolution through DNA shuffling for the improvement and understanding of genes and promoters

Werkman, J. R., Pattanaik, S. & Yuan, L., 2011, In: Methods in Molecular Biology. 754, p. 325-42 18 p.

Research output: Contribution to journal › Article › peer-review

Directed Evolution Through DNA Shuffling for the Improvement and Understanding of Genes and Promoters

Werkman, J. R., Pattanaik, S. & Yuan, L., 2011, Plant Transcription Factors: Methods and Protocols. p. 325-342 18 p. (Methods in Molecular Biology; vol. 754).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

4 Scopus citations

Engineering lower inhibitor affinities in β-d-xylosidase of Selenomonas ruminantium by site-directed mutagenesis of Trp145

Jordan, D. B., Wagschal, K., Fan, Z., Yuan, L., Braker, J. D. & Heng, C., Nov 2011, In: Journal of Industrial Microbiology and Biotechnology. 38, 11, p. 1821-1835 15 p.

Research output: Contribution to journal › Article › peer-review

14 Scopus citations

Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active

Bai, Y., Pattanaik, S., Patra, B., Werkman, J. R., Xie, C. H. & Yuan, L., Aug 2011, In: Planta. 234, 2, p. 363-375 13 p.

Research output: Contribution to journal › Article › peer-review

100 Scopus citations

Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active

Bai, Y., Pattanaik, S., Patra, B., Werkman, J. R., Xie, C. H. & Yuan, L., Aug 2011, In: Planta. 234, 2, p. 363-75 13 p.

Research output: Contribution to journal › Article › peer-review

Increased hydrogen production by genetic engineering of escherichia coli

Fan, Z., Yuan, L. & Chatterjee, R., Apr 15 2011, Genetic Engineering: Recent Developments in Applications. p. 11-27 17 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

Preface

Yuan, L. & Perry, S. E., 2011, Plant Transcription Factors: Methods and Protocols. p. v-vi (Methods in Molecular Biology; vol. 754).

Research output: Chapter in Book/Report/Conference proceeding › Foreword/postscript

The transcription factor CrWRKY1 positively regulates the terpenoid indole alkaloid biosynthesis in Catharanthus roseus

Suttipanta, N., Pattanaik, S., Kulshrestha, M., Patra, B., Singh, S. K. & Yuan, L., Dec 2011, In: Plant Physiology. 157, 4, p. 2081-93 13 p.

Research output: Contribution to journal › Article › peer-review

The transcription factor CrWRKY1 positively regulates the terpenoid indole alkaloid biosynthesis in Catharanthus roseus

Suttipanta, N., Pattanaik, S., Kulshrestha, M., Patra, B., Singh, S. K. & Yuan, L., Dec 2011, In: Plant Physiology. 157, 4, p. 2081-2093 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

343 Scopus citations

2010

Engineering lower inhibitor affinities in β-D-xylosidase

Fan, Z., Yuan, L., Jordan, D. B., Wagschal, K., Heng, C. & Braker, J. D., Apr 2010, In: Applied Microbiology and Biotechnology. 86, 4, p. 1099-1113 15 p.

Research output: Contribution to journal › Article › peer-review

19 Scopus citations

Enhanced salt tolerance of transgenic tobacco plants by co-expression of PcINO1 and McIMT1 is accompanied by increased level of myo-inositol and methylated inositol

Patra, B., Ray, S., Richter, A. & Majumder, A. L., Sep 2010, In: Protoplasma. 245, 1-4, p. 143-52 10 p.

Research output: Contribution to journal › Article › peer-review

55 Scopus citations

Identification and organization of chloroplastic and cytosolic L-myo-inositol 1-phosphate synthase coding gene(s) in Oryza sativa: comparison with the wild halophytic rice, Porteresia coarctata

Ray, S., Patra, B., Das-Chatterjee, A., Ganguli, A. & Majumder, A. L., Apr 2010, In: Planta. 231, 5, p. 1211-27 17 p.

Research output: Contribution to journal › Article › peer-review

13 Scopus citations

Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco

Pattanaik, S., Kong, Q., Zaitlin, D., Werkman, J. R., Xie, C. H., Patra, B. & Yuan, L., Apr 2010, In: Planta. 231, 5, p. 1061-1076 16 p.

Research output: Contribution to journal › Article › peer-review

146 Scopus citations

Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco

Pattanaik, S., Kong, Q., Zaitlin, D., Werkman, J. R., Xie, C. H., Patra, B. & Yuan, L., Apr 2010, In: Planta. 231, 5, p. 1061-76 16 p.

Research output: Contribution to journal › Article › peer-review

Production of multifunctional chimaeric enzymes in plants: A promising approach for degrading plant cell wall from within

Fan, Z. & Yuan, L., Apr 2010, In: Plant Biotechnology Journal. 8, 3, p. 308-315 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

18 Scopus citations

Site-directed mutagenesis and saturation mutagenesis for the functional study of transcription factors involved in plant secondary metabolite biosynthesis

Pattanaik, S., Werkman, J. R., Kong, Q. & Yuan, L., 2010, In: Methods in Molecular Biology. 643, p. 47-57 11 p.

Research output: Contribution to journal › Article › peer-review

Site-directed mutagenesis and saturation mutagenesis for the functional study of transcription factors involved in plant secondary metabolite biosynthesis

Pattanaik, S., Werkman, J. R., Kong, Q. & Yuan, L., 2010, Plant Secondary Metabolism Engineering: Methods and Applications. Fett-Neto, A. G. (ed.). p. 47-57 11 p. (Methods in Molecular Biology; vol. 643).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

17 Scopus citations

2009

Engineering of a multifunctional hemicellulase

Fan, Z., Werkman, J. R. & Yuan, L., May 2009, In: Biotechnology Letters. 31, 5, p. 751-757 7 p.

Research output: Contribution to journal › Article › peer-review

39 Scopus citations

Increased hydrogen production by genetic engineering of Escherichia coli

Fan, Z., Yuan, L. & Chatterjee, R., Feb 12 2009, In: PLoS ONE. 4, 2, e4432.

Research output: Contribution to journal › Article › peer-review

Open Access

52 Scopus citations

Multimeric hemicellulases facilitate biomass conversion

Fan, Z., Wagschal, K., Chen, W., Montross, M. D., Lee, C. C. & Yuan, L., Mar 2009, In: Applied and Environmental Microbiology. 75, 6, p. 1754-1757 4 p.

Research output: Contribution to journal › Article › peer-review

Open Access

40 Scopus citations

The construction and characterization of two xylan-degrading chimeric enzymes

Fan, Z., Wagschal, K., Lee, C. C., Kong, Q., Shen, K. A., Maiti, I. B. & Yuan, L., Feb 15 2009, In: Biotechnology and Bioengineering. 102, 3, p. 684-692 9 p.

Research output: Contribution to journal › Article › peer-review

43 Scopus citations

2008

Inositol methyl tranferase from a halophytic wild rice, Porteresia coarctata Roxb. (Tateoka): regulation of pinitol synthesis under abiotic stress

Sengupta, S., Patra, B., Ray, S. & Majumder, A. L., Oct 2008, In: Plant, Cell and Environment. 31, 10, p. 1442-59 18 p.

Research output: Contribution to journal › Article › peer-review

82 Scopus citations

Production of artemisinin by genetically-modified microbes

Zeng, Q., Qiu, F. & Yuan, L., Apr 2008, In: Biotechnology Letters. 30, 4, p. 581-592 12 p.

Research output: Contribution to journal › Review article › peer-review

74 Scopus citations

The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength

Pattanaik, S., Xie, C. H. & Yuan, L., Feb 2008, In: Planta. 227, 3, p. 707-15 9 p.

Research output: Contribution to journal › Article › peer-review

The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength

Pattanaik, S., Xie, C. H. & Yuan, L., Feb 2008, In: Planta. 227, 3, p. 707-715 9 p.

Research output: Contribution to journal › Article › peer-review

66 Scopus citations

2007

Creation of master transcription factors to regulate plant metabolic pathways

Pattanaik, S., Xie, C. H. & Yuan, L., 2007, In: Acta Horticulturae. 756, p. 109-117 9 p.

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Functional identification of sll1383 from Synechocystis sp PCC 6803 as L-myo-inositol 1-phosphate phosphatase (EC 3.1.3.25): molecular cloning, expression and characterization

Patra, B., Ghosh Dastidar, K., Maitra, S., Bhattacharyya, J. & Majumder, A. L., May 2007, In: Planta. 225, 6, p. 1547-58 12 p.

Research output: Contribution to journal › Article › peer-review

10 Scopus citations

Plant peptide deformylase: a novel selectable marker and herbicide target based on essential cotranslational chloroplast protein processing

Hou, C.-X., Dirk, L. M. A., Pattanaik, S., Das, N. C., Maiti, I. B., Houtz, R. L. & Williams, M. A., Mar 2007, In: Plant Biotechnology Journal. 5, 2, p. 275-81 7 p.

Research output: Contribution to journal › Article › peer-review

Promoter analysis of the Catharanthus roseus geraniol 10-hydroxylase gene involved in terpenoid indole alkaloid biosynthesis

Suttipanta, N., Pattanaik, S., Gunjan, S., Xie, C. H., Littleton, J. & Yuan, L., Feb 2007, In: Biochimica et Biophysica Acta - Gene Structure and Expression. 1769, 2, p. 139-148 10 p.

Research output: Contribution to journal › Article › peer-review

53 Scopus citations

Kentucky Tobacco Research and Development Center (KTRDC)

Research output

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