Markey Cancer Center / Cancer Research Priority Initiative

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  • 2011

    Advancing critical care in the ICU: A human-centered biomedical data visualization systems

    Faiola, A. & Newlon, C., 2011, Ergonomics and Health Aspects of Work with Computers - International Conference, EHAWC 2011, Held as Part of HCI International 2011, Proceedings. p. 119-128 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6779 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    31 Scopus citations

  • A microfabricated preconcentrating device for exhaled breath analysis

    Li, M., Biswas, S., Nantz, M. H., Higashi, R. M. & Fu, X. A., 2011, 2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11. p. 1148-1151 4 p. 5969255. (2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Detection of lobular carcinoma in situ(LCIS) by image analysis

    Kim, S., Kim, D., Choi, H. J. & Joo, H. J., 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 623-624 2 p. 6112440. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • High-throughput virtual molecular docking: Hadoop implementation of AutoDock4 on a private cloud

    Ellingson, S. R. & Baudry, J., 2011, ECMLS'11 - Proceedings of the 2nd International Workshop on Emerging Computational Methods for the Life Sciences. p. 33-38 6 p. (ECMLS'11 - Proceedings of the 2nd International Workshop on Emerging Computational Methods for the Life Sciences).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    15 Scopus citations

  • RASP: Efficient multidimensional range query on attack-resilient encrypted databases

    Chen, K., Kavuluru, R. & Guo, S., 2011, CODASPY'11 - Proceedings of the 1st ACM Conference on Data and Application Security and Privacy. p. 249-260 12 p. (CODASPY'11 - Proceedings of the 1st ACM Conference on Data and Application Security and Privacy).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    20 Scopus citations

  • Semantic predications for complex information needs in biomedical literature

    Cameron, D., Kavuluru, R., Bodenreider, O., Mendes, P. N., Sheth, A. P. & Thirunarayan, K., 2011, Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011. p. 512-519 8 p. 6120494. (Proceedings - 2011 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations
  • 2010

    Image interpolation via combining patches based on point-sampling and new edge-directed ideas

    Yue, Y., Zhang, C., Cheng, F., Li, X. & Wang, K., 2010, Proceedings - 2010 3rd International Congress on Image and Signal Processing, CISP 2010. p. 1195-1199 5 p. 5647211. (Proceedings - 2010 3rd International Congress on Image and Signal Processing, CISP 2010; vol. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations
  • 2009

    A novel visualization tool for evaluating medication side-effects in multi-drug regimens

    Duke, J., Faiola, A. & Kharrazi, H., 2009, Human-Computer Interaction: Interacting in Various Application Domains - 13th International Conference, HCI International 2009, Proceedings. PART 4 ed. p. 478-487 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5613 LNCS, no. PART 4).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Automatic histologic grading for lobular carcinoma in situ

    Kim, S. J., Jeong, H. K., Choi, H. J. & Kim, D., 2009, World Congress on Medical Physics and Biomedical Engineering: Diagnostic Imaging. 2 ed. p. 654-657 4 p. (IFMBE Proceedings; vol. 25, no. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Constructing G1 quadratic Beźier curves with arbitrary endpoint tangent vectors

    Gu, H. J., Yong, J. H., Paul, J. C. & Cheng, F. F., 2009, Proceedings - 2009 11th IEEE International Conference on Computer-Aided Design and Computer Graphics, CAD/Graphics 2009. p. 263-267 5 p. 5246892. (Proceedings - 2009 11th IEEE International Conference on Computer-Aided Design and Computer Graphics, CAD/Graphics 2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Exploiting domain knowledge to improve biological significance of biclusters with key missing genes

    Chen, J., Ji, L., Hsu, W., Tan, K. L. & Rhee, S. Y., 2009, Proceedings - 25th IEEE International Conference on Data Engineering, ICDE 2009. p. 1219-1222 4 p. 4812505. (Proceedings - International Conference on Data Engineering).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Fast spherical mapping for genus-0 meshes

    Lai, S., Cheng, F. & Fan, F., 2009, Advances in Visual Computing - 5th International Symposium, ISVC 2009, Proceedings. PART 2 ed. p. 982-991 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5876 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • GPU supported patch-based tessellation for dual subdivision

    Fan, F. & Cheng, F., 2009, Proceedings of the 2009 6th International Conference on Computer Graphics, Imaging and Visualization: New Advances and Trends, CGIV2009. p. 5-10 6 p. 5298385. (Proceedings of the 2009 6th International Conference on Computer Graphics, Imaging and Visualization: New Advances and Trends, CGIV2009).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Healthcare game design: Behavioral modeling of serious gaming design for children with chronic diseases

    Kharrazi, H., Faiola, A. & Defazio, J., 2009, Human-Computer Interaction: Interacting in Various Application Domains - 13th International Conference, HCI International 2009, Proceedings. PART 4 ed. p. 335-344 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5613 LNCS, no. PART 4).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    35 Scopus citations
  • 2008

    2 n -Periodic binary sequences with fixed k-error linear complexity for k = 2 or 3

    Kavuluru, R., 2008, Sequences and Their Applications - SETA 2008 - 5th International Conference, Proceedings. p. 252-265 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5203 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations

  • An investigation of digital signal processing for shaped pulses for all-digital PET

    Xie, Q., Zhu, J., Wang, X., Zhang, B., Zhu, C., Guo, N., Zhang, Z., Chen, C. T., Wah, Y. W., Bogdan, M. & Kao, C. M., 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69134B. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • An iterative method for fast mesh denoising

    Lai, S. & Cheng, F., 2008, Advances in Visual Computing - 4th International Symposium, ISVC 2008, Proceedings. PART 2 ed. p. 1034-1043 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5359 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2007

    A new feature selection method for improving the precision of diagnosing abnormal protein sequences by support vector machine and vectorization method

    Kim, E. M., Jeong, J. C., Pae, H. Y. & Lee, B. H., 2007, Adaptive and Natural Computing Algorithms - 8th International Conference, ICANNGA 2007, Proceedings. PART 2 ed. p. 364-372 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4432 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    2 Scopus citations

  • Brush-on fabrication of suspended PLLA-PEO-PLLA triblock copolymer fibers

    Berry, S. M., Pabba, S., Fernandes, J. L., Rathfon, J. M., Aamer, K. A., Tew, G. N., Gobin, A. S., Cohn, R. W. & Keynton, R. S., 2007, Proceedings of the SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2007. p. 515-521 7 p. (Proceedings of the SEM Annual Conference and Exposition on Experimental and Applied Mechanics 2007; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Enhanced recursive feature elimination

    Chen, X. W. & Jeong, J. C., 2007, Proceedings - 6th International Conference on Machine Learning and Applications, ICMLA 2007. p. 429-435 7 p. 4457268. (Proceedings - 6th International Conference on Machine Learning and Applications, ICMLA 2007).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    152 Scopus citations

  • Locally adjustable interpolation for meshes of arbitrary topology

    Lai, S., Cheng, F. & Fan, F., 2007, Advances in Visual Computing - Third International Symposium, ISVC 2007, Proceedings. PART 1 ed. p. 88-97 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4841 LNCS, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Parameterization of quadrilateral meshes

    Liu, L., Zhang, C. M. & Cheng, F., 2007, Computational Science - ICCS 2007 - 7th International Conference, Proceedings. PART 2 ed. p. 17-24 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4488 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    Open Access
    1 Scopus citations
  • 2006

    A new approach for finding an optimal solution and regularization by learning dynamic momentum

    Kim, E. M., Jeong, J. C. & Lee, B. H., 2006, Artificial Intelligence and Soft Computing - ICAISC 2006 - 8th International Conference, Proceedings. p. 29-36 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4029 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Functional Imaging of Blood Flow in Brain and in Tumors during Therapy

    Durduran, T., Zhou, C., Yu, G., Sunar, U., Choe, R., Burnett, M. G., Pluta, J., Hoang, A. M., Mahoney-Wilensky, E., Bloom, S. A., Pellegrini, C., Kasner, S., Cucchiara, B., Messe, S., Shah, Q., Wang, J. J., Busch, T. M., Greenberg, J. H., Detre, J. A. & Yodh, A. G., 2006, Laser Science, LS 2006. JThA2. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Non-invasive, continuous monitoring of a vascular targeting drug by diffuse optical blood flow and blood oxygenation measurements

    Sunar, U., Makonnen, S., Wang, H. W., Durduran, T., Zhou, C., Yu, G., Lee, W. M. F. & Yodh, A. G., 2006, Biomedical Topical Meeting, BIO 2006. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2005

    Surface roughness index, a novel approach to compare protein surfaces

    Varadwaj, P. K., Lahiri, T. & Tsodikov, O., 2005, Proceedings of 2005 International Conference on Intelligent Sensing and Information Processing, ICISIP'05. p. 474-478 5 p. 1529501. (Proceedings - 2005 International Conference on Intelligent Sensing and Information Processing, ICISIP'05; vol. 2005).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2004

    Clinical responses of head & neck tumors to radiation therapy by NIR spectroscopy

    Sunar, U., Zhang, J., Du, J., Durduran, T., Zhou, C., Yu, G., Kilger, A., Quon, H., Lustig, R., Loevner, L., Nioka, S., Pourrezaei, K., Yodh, A. G. & Chance, B., 2004, Biomedical Topical Meeting, BIOMED 2004. FB7. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Diffuse Optical Measurements of Oxygen Metabolism in Human Brain during Sensorimotor Stimulus

    Durduran, T., Yu, G., Burnett, M. G., Zhou, C., Detre, J. A., Greenberg, J. H. & Yodh, A. G., 2004, Biomedical Topical Meeting, BIOMED 2004. WE4. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Knot choosing by accommodating the first derivative constraint

    Zhang, C. & Cheng, F., 2004, Proceedings - Geometric Modeling and Processing 2004. Hu, S. M. & Pottmann, H. (eds.). p. 31-37 7 p. (Proceedings - Geometric Modeling and Processing 2004).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Non-Invasive Measurements of Deep Tissue Hemodynamics in Human Skeletal Muscle

    Yu, G., Durduran, T., Lech, G., Zhou, C., Britton, C. & Yodh, A. G., 2004, Biomedical Topical Meeting, BIOMED 2004. SH1. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Optimization of 3D Flow Imaging by Diffuse Correlation Tomography

    Zhou, C., Durduran, T., Yu, G. & Yodh, A. G., 2004, Biomedical Topical Meeting, BIOMED 2004. WF29. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Prediction of Treatment Efficacy by Blood Flow Responses to PDT in RIF Tumors

    Yu, G., Durduran, T., Zhou, C., Putt, M., Yodh, A. G. & Busch, T. M., 2004, Biomedical Topical Meeting, BIOMED 2004. WC5. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Smooth trimmed NURBS surface connection with tension control

    Zhang, P. & Cheng, F., 2004, Proceedings - Geometric Modeling and Processing 2004. Hu, S. M. & Pottmann, H. (eds.). p. 56-65 10 p. (Proceedings - Geometric Modeling and Processing 2004).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    4 Scopus citations

  • Spatio-Temporal Quantification of Cerebral Blood Flow During Forepaw Stimulation of the Rat Using Laser Speckle Flowmetry

    Durduran, T., Yu, G., Burnett, M. G., Zhou, C., Furuya, D., Detre, J. A., Greenberg, J. H. & Yodh, A. G., 2004, Biomedical Topical Meeting, BIOMED 2004. FE4. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • Transabdominal Near-infrared Fetal Brain Oximetry

    Choe, R., Durduran, T., Yu, G., Nijland, M. J. M., Chance, B., Yodh, A. G. & Ramanujam, N., 2004, Biomedical Topical Meeting, BIOMED 2004. FB4. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 2002

    Cerebral Hemodynamics during Cortical Spreading Depression at different states of brain oxygenation and ventilation

    Durduran, T., Yu, G., Culver, J. P., Cheung, C., Furuya, D., Greenberg, J. H. & Yodh, A. G., 2002, Biomedical Topical Meeting, BIOMED 2002. p. 164-166 3 p. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    3 Scopus citations

  • Effects of Duration, Hypoxia and Hypercapnia on Rat Brain Hemodynamics during Forepaw Stimulation

    Durduran, T., Yu, G., Furuya, D., Choe, R., Culver, J. P., Cheung, C., Greenberg, J. H. & Yodh, A. G., 2002, Biomedical Topical Meeting, BIOMED 2002. p. 47-49 3 p. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations

  • Frequency domain diffuse optical multiplexing system for rapid hemodynamics

    Yu, G., Durduran, T., Furuya, D., Choe, R., Greenberg, J. H. & Yodh, A. G., 2002, Biomedical Topical Meeting, BIOMED 2002. p. 184-186 3 p. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    1 Scopus citations
  • 1999

    Constrained shape scaling of trimmed NURBS surfaces

    Zhang, P., Zhang, C. & Cheng, F., 1999, 11th International Conference on Design Theory and Methodology. p. 131-140 10 p. (Proceedings of the ASME Design Engineering Technical Conference; vol. 3).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    7 Scopus citations
  • 1997

    THE WORK OF BREATHING IN A NONLINEAR HUMAN LUNG MODEL

    Athanasiades, A., Ghorbel, F., Clark, J. W., Niranjan, S. C., Liu, C. H., Zwischenberger, J. B. & Bidani, A., 1997, Dynamic Systems and Control. p. 433-438 6 p. (ASME International Mechanical Engineering Congress and Exposition, Proceedings (IMECE); vol. 1997-Q).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  • 1991

    A blending model for parametrically defined geometric objects

    Bien, A. P. & Cheng, F., May 1 1991, Proceedings of the 1st ACM Symposium on Solid Modeling Foundations and CAD/CAM Applications, SMA 1991. p. 339-347 9 p. (Proceedings of the 1st ACM Symposium on Solid Modeling Foundations and CAD/CAM Applications, SMA 1991).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

    8 Scopus citations