Toxicology and Cancer Biology

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  • 2024

    Using 3-Dimensional Cultures to Propagate Genetically Modified Lung Organoids

    Chen, F., Naughton, K. J., Lee, J. H. & Brainson, C. F., 2024, Methods in Molecular Biology. p. 19-30 12 p. (Methods in Molecular Biology; vol. 2805).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2023

    Analysis of Copy Number Variation of DNA Repair/Damage Response Genes in Tumor Tissues

    Izumi, T., 2023, Methods in Molecular Biology. p. 231-242 12 p. (Methods in Molecular Biology; vol. 2701).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Insecticidal proteins and RNAi in the control of insects

    Vélez, A. M., Narva, K., Darlington, M., Mishra, S., Hellmann, C., Rodrigues, T. B., Duman-Scheel, M., Palli, S. R. & Jurat-Fuentes, J. L., Jan 2023, Insecticidal Proteins and RNAi in the Control of Insects. p. 1-54 54 p. (Advances in Insect Physiology; vol. 65).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Juvenile hormone receptor Methoprene tolerant: Functions and applications

    Palli, S. R., Jan 2023, Hormone Receptors: Structures and Functions. Litwack, G. (ed.). p. 619-644 26 p. (Vitamins and Hormones; vol. 123).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations
  • 2022

    Par-4 in Cell Cycle Regulation

    Zhang, Y., Mao, F. & Liu, X., Jan 1 2022, Tumor Suppressor Par-4: Structural Features, Molecular Mechanisms and Function. p. 61-93 33 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Role of Par-4 in B-cell hematological malignancies

    Noothi, S. K., McKenna, M. K., Alhakeem, S. S., Collard, J. P., Greene, J. T., Muthusamy, N., Rangnekar, V. M. & Bondada, S., Jan 1 2022, Tumor Suppressor Par-4: Role in Cancer and Other Diseases. p. 133-148 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Targeting Redox Signaling and ROS Metabolism in Cancer Treatment

    Ali, E. S., Barua, D., Saha, S. K., Ahmed, M. U., Mishra, S. K. & Mubarak, M. S., Jan 1 2022, Handbook of Oxidative Stress in Cancer: Mechanistic Aspects. Vol. 3. p. 1791-1818 28 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • The Par-4 tumor suppressor protein in TCL1-induced leukemogenesis

    Greene, J. T., McKenna, M. K., Bondada, S. & Muthusamy, N., Jan 1 2022, Tumor Suppressor Par-4: Role in Cancer and Other Diseases. p. 149-159 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2021

    Base excision repair and nucleotide excision repair

    Izumi, T. & Mellon, I., Jan 1 2021, Genome Stability: From Virus to Human Application. p. 293-322 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    6 Scopus citations

  • Interactions of Hematopoietic Stem Cells with Bone Marrow Niche

    Zhao, X., Zhang, C., Cui, X. & Liang, Y., 2021, Methods in Molecular Biology. p. 21-34 14 p. (Methods in Molecular Biology; vol. 2346).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    6 Scopus citations
  • 2020

    Chromatin isolation by RNA purification (ChIRP) and its applications

    Tian, C. & Hu, G., Jan 1 2020, Epigenetics Methods. p. 507-521 15 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Long Noncoding RNAs in Substance Use Disorders

    Tian, C. & Hu, G., 2020, RNA Technologies. p. 465-490 26 p. (RNA Technologies; vol. 11).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Software supporting a workflow of quantitative dynamic flux maps estimation in central metabolism from SIRM experimental data

    Selivanov, V. A., Marin, S., Tarragó-Celada, J., Lane, A. N., Higashi, R. M., Fan, T. W. M., de Atauri, P. & Cascante, M., 2020, Methods in Molecular Biology. p. 271-298 28 p. (Methods in Molecular Biology; vol. 2088).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    5 Scopus citations
  • 2019

    cAMP-mediated regulation of melanocyte genomic instability: A melanoma-preventive strategy

    Holcomb, N. C., Bautista, R. M., Jarrett, S. G., Carter, K. M., Gober, M. K. & D'Orazio, J. A., Jan 1 2019, Advances in Protein Chemistry and Structural Biology. p. 247-295 49 p. (Advances in Protein Chemistry and Structural Biology; vol. 115).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    17 Scopus citations

  • Lysine acetylation of proteins and its characterization in human systems

    Orren, D. K. & Machwe, A., 2019, Methods in Molecular Biology. p. 107-130 24 p. (Methods in Molecular Biology; vol. 1983).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    5 Scopus citations

  • Metabolic labeling of cultured mammalian cells for stable isotope-resolved metabolomics: Practical aspects of tissue culture and sample extraction

    Crooks, D. R., Fan, T. W. M. & Linehan, W. M., 2019, Methods in Molecular Biology. p. 1-27 27 p. (Methods in Molecular Biology; vol. 1928).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    11 Scopus citations

  • Quantification of Isotopologues of Amino Acids by Multiplexed Stable Isotope-Resolved Metabolomics Using Ultrahigh-Resolution Mass Spectrometry Coupled with Direct Infusion

    Yang, Y., Fan, T. W. M., Lane, A. N. & Higashi, R. M., 2019, Methods in Molecular Biology. p. 57-68 12 p. (Methods in Molecular Biology; vol. 2030).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    3 Scopus citations

  • Stable Isotope-Resolved Metabolomics by NMR

    Lin, P., Lane, A. N. & Fan, T. W. M., 2019, Methods in Molecular Biology. p. 151-168 18 p. (Methods in Molecular Biology; vol. 2037).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    13 Scopus citations

  • Toxicology of chromium(VI)

    Wise, J. T. F., Shi, X. & Zhang, Z., Jan 1 2019, Encyclopedia of Environmental Health. p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    8 Scopus citations
  • 2018

    Antioxidant therapy against persistent organic pollutants and associated diseases

    Hennig, B., Petriello, M. C., Newsome, B. J., Perkins, J. T. & Liu, D., Jan 1 2018, Nutritional Antioxidant Therapies: Treatments and Perspectives. p. 217-246 30 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations
  • 2017

    Introduction

    Evans, T. M., Lundsteen, N. & Vanderford, N. L., Jan 1 2017, ReSearch. p. 3 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Metabolic disorders and cancer: Hepatocyte store-operated Ca2+ channels in nonalcoholic fatty liver disease

    Ali, E. S., Rychkov, G. Y. & Barritt, G. J., 2017, Advances in Experimental Medicine and Biology. p. 595-621 27 p. (Advances in Experimental Medicine and Biology; vol. 993).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    25 Scopus citations

  • Overcoming Knowledge and Experience Gaps

    Vanderford, N. L., Jan 1 2017, ReSearch. p. 87-104 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Realities of the Job Market

    Vanderford, N. L., Jan 1 2017, ReSearch. p. 11-18 8 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Role of mitochondrial reactive oxygen species in the activation of cellular signals, molecules, and function

    Indo, H. P., Hawkins, C. L., Nakanishi, I., Matsumoto, K. I., Matsui, H., Suenaga, S., Davies, M. J., St Clair, D. K., Ozawa, T. & Majima, H. J., 2017, Handbook of Experimental Pharmacology. (Handbook of Experimental Pharmacology; vol. 240).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    47 Scopus citations

  • The effects of withaferin a on normal and malignant immune cells

    Alhakeem, S. S., McKenna, M. K., Oben, K. Z., Gachuki, B. W., Noothi, S. K., Muthusamy, N., Rangnekar, V. M., Gupta, R. C. & Bondada, S., Sep 13 2017, Science of Ashwagandha: Preventive and Therapeutic Potentials. p. 227-242 16 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • The “Me Brand”

    Vanderford, N. L., Jan 1 2017, ReSearch. p. 119-138 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Transferable Skills

    Vanderford, N. L., Jan 1 2017, ReSearch. p. 105-118 14 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations
  • 2016

    Base Excision Repair and Nucleotide Excision Repair

    Izumi, T. & Mellon, I., Sep 21 2016, Genome Stability: From Virus to Human Application. p. 275-302 28 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    10 Scopus citations

  • Hormonal regulation of development and reproduction

    Palli, S. R., Jan 1 2016, Management of Insect Pests to Agriculture: Lessons Learned from Deciphering their Genome, Transcriptome and Proteome. p. 97-114 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Lung Cancer Stem Cells: Drivers of a Genetically and Histologically Complex Disease

    Fillmore Brainson, C. & Kim, C. F., Sep 1 2016, Cancer Stem Cells: Targeting the Roots of Cancer, Seeds of Metastasis, and Sources of Therapy Resistance. p. 149-175 27 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Melanocortin 1 receptor (MC1R) as a global regulator of cutaneous UV responses: Molecular interactions and opportunities for melanoma prevention

    Wolf Horrell, E. M. & D’Orazio, J. A., Jan 1 2016, Skin Stress Response Pathways: Environmental Factors and Molecular Opportunities. p. 155-174 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations

  • Regulation of Autophagy by microRNAs: Implications in Cancer Therapy

    Zhu, H. & Yang, J. M., 2016, Current Cancer Research. p. 59-84 26 p. (Current Cancer Research).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • RNA interference: History, mechanisms, and applications in pest management

    Palli, S. R., Jan 1 2016, Arthropod Diversity and Conservation in the Tropics and Sub-Tropics. p. 397-413 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2015

    UV protection of the skin by topically-applied forskolin

    Amaro-Ortiz, A., Boulanger, M. & D'Orazio, J., Jan 1 2015, Forskolin: Sources, Mechanisms of Action and Health Effects. p. 1-29 29 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2014

    Fasciculations

    Dotson, W. F. & Kasarskis, E. J., Jan 1 2014, Encyclopedia of the Neurological Sciences. p. 275 1 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Lung Stem and Progenitor Cells in Tissue Homeostasis and Disease

    Leeman, K. T., Fillmore, C. M. & Kim, C. F., 2014, Current Topics in Developmental Biology. p. 207-233 27 p. (Current Topics in Developmental Biology; vol. 107).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    Open Access
    65 Scopus citations

  • Mitochondrion: A novel center for cancer cell signaling

    Miriyala, S., Holley, A. K. & Clair, D. K. S., Apr 1 2014, Mitochondria: The Anti-Cancer Target for the Third Millennium. Vol. 9789401789844. p. 1-38 38 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • Muscle Tone

    Katner, T. L. & Kasarskis, E. J., Jan 1 2014, Encyclopedia of the Neurological Sciences. p. 194-196 3 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • PDCD4

    Yang, H. S., Wang, Q., Bajer, M. M. & Schmid, T., Mar 1 2014, Translation and Its Regulation in Cancer Biology and Medicine. p. 135-161 27 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • Urinary tract malignancies of infancy and young childhood

    D’Orazio, J., Michaels, S., Romond, J. & Pulliam, J., Jan 1 2014, Kidney and Urinary Tract Diseases in the Newborn. p. 239-261 23 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2013

    Alpha-Fetoprotein

    Spear, B. T., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. p. 89-91 3 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • BHLH transcription factors: Potential target sites for insecticide development

    Bitra, K. & Palli, S. R., Oct 1 2013, Advanced Technologies for Managing Insect Pests. p. 13-30 18 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • Drug Discovery in the Autophagy Pathways

    Liu, B., Cheng, Y. & Yang, J. M., 2013, Autophagy in Health and Disease. p. 161-180 20 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    3 Scopus citations

  • G protein-coupled receptors as target sites for insecticide discovery

    Bai, H. & Palli, S. R., Oct 1 2013, Advanced Technologies for Managing Insect Pests. p. 57-82 26 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    13 Scopus citations

  • The melanocortin-1 receptor: A key melanoma risk determinant and a critical regulator of the UV DNA damage repair response

    Jarrett, S. G., Ammo-Ortiz, A., Tucker, J. & D'Orazio, J., 2013, Skin Pigmentation: Genetics, Geographic Variation and Disorders. p. 1-56 56 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  • 2012

    Chemotherapy-induced oxidative stress in nontargeted normal tissues

    Jungsuwadee, P., Vore, M. & St. Clair, D. K., Jan 1 2012, Oxidative Stress in Cancer Biology and Therapy. p. 97-129 33 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    4 Scopus citations

  • Clinical aspects of metabolomics

    Bousamra, M., Day, J., Fan, T. W. M., Kloecker, G., Lane, A. N. & Miller, D. M., 2012, The Handbook of Metabolomics. Fan, T.W.-M., Higashi, R. & Lane, A. (eds.). p. 29-60 32 p. (Methods in Pharmacology and Toxicology; vol. 17).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    2 Scopus citations

  • Considerations of sample preparation for metabolomics investigation

    Fan, T. W. M., 2012, The Handbook of Metabolomics. Fan, T.W.-M., Higashi, R. & Lane, A. (eds.). p. 7-27 21 p. (Methods in Pharmacology and Toxicology; vol. 17).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    33 Scopus citations

  • Insect Genomics

    Palli, S. R., Bai, H. & Wigginton, J., 2012, Insect Molecular Biology and Biochemistry. p. 1-29 29 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

    1 Scopus citations