Assessing the Consistency of Modeling in Complex Ontologies: A Study of the Musculoskeletal System of the Foundational Model of Anatomy

Melissa D. Clarkson, Landon T. Detwiler, Kristen M. Platt, Steven Roggenkamp

Research output: Contribution to journalConference articlepeer-review

Abstract

Biomedical ontologies with many types of relations allow a domain of interest to be modeled with a high level of semantic specificity and expressivity. However, the complexity of modeling with many relations can introduce inconsistencies and errors into the representation. Using the Foundational Model of Anatomy as a case study, we identified and analyzed the musculoskeletal content to show both consistencies and inconsistencies in the use of relations for modeling. We also share our early work in addressing the problem of consistency in ontology modeling through use of ontology-specific design patterns.

Original languageEnglish
Pages (from-to)13-23
Number of pages11
JournalCEUR Workshop Proceedings
Volume3073
StatePublished - 2021
Event2021 International Conference on Biomedical Ontologies, ICBO 2021 - Bozen-Bolzano, Italy
Duration: Sep 16 2021Sep 18 2021

Bibliographical note

Publisher Copyright:
© 2021 Copyright for this paper by its authors.

Keywords

  • Anatomy
  • Knowledge representation
  • Ontology
  • Ontology auditing
  • Quality assurance

ASJC Scopus subject areas

  • General Computer Science

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