TY - JOUR
T1 - Automated classification of evoked quantal events
AU - Lancaster, Mark
AU - Viele, Kert
AU - Johnstone, A. F.M.
AU - Cooper, Robin L.
PY - 2007/1/30
Y1 - 2007/1/30
N2 - We provide both theoretical and computational improvements to the analysis of synaptic transmission data. Theoretically, we demonstrate the correlation structure of observations within evoked postsynaptic potentials (EPSP) are consistent with multiple random draws from a common autoregressive moving-average (ARMA) process of order (2, 2). We use this observation and standard time series results to construct a statistical hypothesis testing procedure for determining whether a given trace is an EPSP. Computationally, we implement this method in R, a freeware statistical language, which reduces the amount of time required for the investigator to classify traces into EPSPs or non-EPSPs and eliminates investigator subjectivity from this classification. In addition, we provide a computational method for calculating common functionals of EPSPs (peak amplitude, decay rate, etc.). The methodology is freely available over the internet. The automated procedure to index the quantal characteristics greatly facilitates determining if any one or multiple parameters are changing due to experimental conditions. In our experience, the software reduces the time required to perform these analyses from hours to minutes.
AB - We provide both theoretical and computational improvements to the analysis of synaptic transmission data. Theoretically, we demonstrate the correlation structure of observations within evoked postsynaptic potentials (EPSP) are consistent with multiple random draws from a common autoregressive moving-average (ARMA) process of order (2, 2). We use this observation and standard time series results to construct a statistical hypothesis testing procedure for determining whether a given trace is an EPSP. Computationally, we implement this method in R, a freeware statistical language, which reduces the amount of time required for the investigator to classify traces into EPSPs or non-EPSPs and eliminates investigator subjectivity from this classification. In addition, we provide a computational method for calculating common functionals of EPSPs (peak amplitude, decay rate, etc.). The methodology is freely available over the internet. The automated procedure to index the quantal characteristics greatly facilitates determining if any one or multiple parameters are changing due to experimental conditions. In our experience, the software reduces the time required to perform these analyses from hours to minutes.
KW - Analysis
KW - Computational
KW - Quantal
KW - Synapse
UR - http://www.scopus.com/inward/record.url?scp=33845424450&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=33845424450&partnerID=8YFLogxK
U2 - 10.1016/j.jneumeth.2006.07.014
DO - 10.1016/j.jneumeth.2006.07.014
M3 - Article
C2 - 16934872
AN - SCOPUS:33845424450
SN - 0165-0270
VL - 159
SP - 325
EP - 336
JO - Journal of Neuroscience Methods
JF - Journal of Neuroscience Methods
IS - 2
ER -