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Automatic Hand Skeletal Shape Estimation from Radiographs

  • Radu Paul Mihail
  • , Nathan Jacobs

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Rheumatoid arthritis (RA) is an autoimmune disease whose common manifestation involves the slow destruction of joint tissue, damage that is visible in a radiograph. Over time, this damage causes pain and loss of functioning which depends, to some extent, on the spatial deformation induced by the joint damage. Building an accurate model of the current deformation and predicting potential future deformations is an important component of treatment planning. Unfortunately, this is currently a time consuming and labor intensive manual process. To address this problem, we propose a fully automated approach for fitting a shape model to the long bones of the hand from a single radiograph. Critically, our shape model allows sufficient flexibility to be useful for patients in various stages of RA. Our approach uses a deep convolutional neural network to extract low-level features and a conditional random field (CRF) to support shape inference. Our approach is significantly more accurate than previous work that used hand-engineered features. We demonstrate this on two large datasets of hand radiographs and highlight the importance of the low-level features, the relative contribution of different potential functions in the CRF, and the accuracy of the final shape estimates. Our approach is nearly as accurate as a trained radiologist and, because it only requires a few seconds per radiograph, can be applied to large datasets to enable better modeling of disease progression. We will release our code and trained models upon acceptance of this paper.

Original languageEnglish
Title of host publicationProceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
EditorsHarald Schmidt, David Griol, Haiying Wang, Jan Baumbach, Huiru Zheng, Zoraida Callejas, Xiaohua Hu, Julie Dickerson, Le Zhang
Pages919-926
Number of pages8
ISBN (Electronic)9781538654880
DOIs
StatePublished - Jan 21 2019
Event2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 - Madrid, Spain
Duration: Dec 3 2018Dec 6 2018

Publication series

NameProceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018

Conference

Conference2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
Country/TerritorySpain
CityMadrid
Period12/3/1812/6/18

Bibliographical note

Publisher Copyright:
© 2018 IEEE.

Funding

This material is based upon work supported by the National Science Foundation under Grant No. IIS-1553116.

FundersFunder number
National Science Foundation (NSF)IIS-1553116

    Keywords

    • conditional random field
    • convolutional neural network
    • radiograph
    • rheumatoid arthritis

    ASJC Scopus subject areas

    • Biomedical Engineering
    • Health Informatics

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