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Automatic Segmentation of Intracochlear Anatomy in MR Images Using a Weighted Active Shape Model

  • Yubo Fan
  • , Rueben A. Banalagay
  • , Nathan D. Cass
  • , Jack H. Noble
  • , Kareem O. Tawfik
  • , Robert F. Labadie
  • , Benoit M. Dawant

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

There is evidence that cochlear MR signal intensity may be useful in prognosticating the risk of hearing loss after middle cranial fossa (MCF) resection of acoustic neuroma (AN), but the manual segmentation of this structure is difficult and prone to error. This hampers both large-scale retrospective studies and routine clinical use of this information. To address this issue, we present a fully automatic method that permits the segmentation of the intra-cochlear anatomy in MR images, which uses a weighted active shape model we have developed and validated to segment the intra-cochlear anatomy in CT images. We take advantage of a dataset for which both CT and MR images are available to validate our method on 132 ears in 66 high-resolution T2-weighted MR images. Using the CT segmentation as ground truth, we achieve a mean Dice (DSC) value of 0.81 and 0.79 for the scala tympani (ST) and the scala vestibuli (SV), which are the two main intracochlear structures.Clinical Relevance - The proposed method is accurate and fully automated for MR image segmentation. It can be used to support large retrospective studies that explore relations between MR signal in preoperative images and outcomes. It can also facilitate the routine and clinical use of this information.

Original languageEnglish
Title of host publication43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021
Pages3573-3576
Number of pages4
ISBN (Electronic)9781728111797
DOIs
StatePublished - 2021
Event43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021 - Virtual, Online, Mexico
Duration: Nov 1 2021Nov 5 2021

Publication series

NameProceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS
Volume2021-January
ISSN (Print)1557-170X

Conference

Conference43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021
Country/TerritoryMexico
CityVirtual, Online
Period11/1/2111/5/21

Bibliographical note

Publisher Copyright:
© 2021 IEEE.

Funding

This research is supported by the National Institutes of Health (NIH) grant R01DC014037, R01DC008408, and R01DC014462 from the National Institute of Deafness and Other Communications Disorders. This work has been supported in part by the NIH, National Institute of Biomedical Imaging and Bioengineering Training Grant No. T32EB021937.

FundersFunder number
National Institutes of Health
National Institute on Deafness and Other Communication DisordersR01DC014037, R01DC014462, R01DC008408
National Institute of Biomedical Imaging and BioengineeringT32EB021937

    ASJC Scopus subject areas

    • Signal Processing
    • Biomedical Engineering
    • Computer Vision and Pattern Recognition
    • Health Informatics

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