D-amino acid catabolism is common among soil-dwelling bacteria

Atanas D. Radkov, Katlyn McNeill, Koji Uda, Luke A. Moe

Research output: Contribution to journalArticlepeer-review

18 Scopus citations

Abstract

Soil and rhizosphere environments were examined in order to determine the identity and relative abundance of bacteria that catabolize d-and l-amino acids as the sole source of carbon and nitrogen. All substrates were readily catabolized by bacteria from both environments, with most d-amino acids giving similar CFU counts to their l-amino acid counterparts. CFU count ratios between l-and d-amino acids typically ranged between 2 and 1. Isolates were phylogenetically typed in order to determine the identity of d-amino acid catabolizers. Actinobacteria, specifically the Arthrobacter genus, were abundant along with members of the α-and β-Proteobacteria classes.

Original languageEnglish
Pages (from-to)165-168
Number of pages4
JournalMicrobes and Environments
Volume31
Issue number2
DOIs
StatePublished - Jun 25 2016

Bibliographical note

Publisher Copyright:
© 2016, Japanese Society of Microbial Ecology. All rights reserved.

Funding

FundersFunder number
Japan Society for the Promotion of Science15K07152

    Keywords

    • Amino acid catabolism
    • Arthrobacter
    • D-amino acids
    • Rhizosphere
    • Soil-dwelling bacteria

    ASJC Scopus subject areas

    • Ecology, Evolution, Behavior and Systematics
    • Soil Science
    • Plant Science

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