Abstract
Objective: Identifying viral genomes in human heart tissues is critical for disease diagnosis and assessment of cardiovascular damage. Human heart tissue samples obtained during a biopsy procedure are routinely used to test for the presence of viruses, as guided by clinical manifestations and prognosis. Furthermore, heart tissue samples obtained post-mortem or during a cardiac transplant procedure serve as a valuable research tool, as they allow for an in-depth assessment of cardiac pathology that can aid in our understanding of molecular pathways associated with disease. Because viral nucleic acid constitutes only a small portion of each sample’s genetic material, appropriate methods are necessary for positive viral genome identification. Results: Snap-frozen heart tissue samples obtained either post-mortem or during a cardiac transplant procedure were used to develop conditions for detection of Parvovirus B19. Briefly, total DNA was isolated from the heart tissue under varying conditions. A PCR-based assay with Parvovirus B19 specific primers was implemented to detect the presence of the viral genome, followed by Sanger Sequencing. The mechanical disruption of the heart tissue, as well as the cardiac tissue processing methods, had a significant effect on the DNA quality and the ability to detect the Parvovirus B19 genome.
| Original language | English |
|---|---|
| Article number | 239 |
| Journal | BMC Research Notes |
| Volume | 16 |
| Issue number | 1 |
| DOIs | |
| State | Published - Dec 2023 |
Bibliographical note
Publisher Copyright:© 2023, BioMed Central Ltd., part of Springer Nature.
Funding
We thank Ahmed Abdel-Latif (University of Michigan), Maya Guglin (Indiana University School of Medicine), Mary Sheppard (University of Kentucky College of Medicine) and the UK Gill Heart & Vascular Institute, KY, for providing the human heart tissue samples. We thank the current and former laboratory members, and our collaborators, for helpful discussions. This research was supported by the Faculty Research Fund from the University of New Haven (AK).
| Funders |
|---|
| UK Gill Heart & Vascular Institute |
| University of Kentucky College of Medicine |
| Michigan Diabetes Research Center, University of Michigan |
| Indiana University School of Medicine |
| University of New Haven |
Keywords
- Heart disease
- Parvovirus B19
- Viral persistence
- Virus identification
ASJC Scopus subject areas
- General Biochemistry, Genetics and Molecular Biology