Draft nuclear genome sequence of the liquid hydrocarbon-accumulating green microalga botryococcus braunii race B (Showa)

Daniel R. Browne; Jerry Jenkins; Jeremy Schmutz; Shengqiang Shu; Kerrie Barry; Jane Grimwood; Jennifer Chiniquy; Aditi Sharma; Thomas D. Niehaus; Taylor L. Weiss; Andrew T. Koppisch; David T. Fox; Suraj Dhungana; Shigeru Okada; Joe Chappell; Timothy P. Devarenne

doi:10.1128/genomeA.00215-17

Draft nuclear genome sequence of the liquid hydrocarbon-accumulating green microalga botryococcus braunii race B (Showa)

Daniel R. Browne
, Jerry Jenkins
, Jeremy Schmutz
, Shengqiang Shu
, Kerrie Barry
, Jane Grimwood
, Jennifer Chiniquy
, Aditi Sharma
, Thomas D. Niehaus
, Taylor L. Weiss
, Andrew T. Koppisch
, David T. Fox
, Suraj Dhungana
, Shigeru Okada
, Joe Chappell
, Timothy P. Devarenne

Research output: Contribution to journal › Article › peer-review

28 Scopus citations

Abstract

Botryococcus braunii has long been known as a prodigious producer of liquid hydrocarbon oils that can be converted into combustion engine fuels. This draft genome for the B race of B. braunii will allow researchers to unravel important hydrocarbon biosynthetic pathways and identify possible regulatory networks controlling this unusual metabolism.

Original language	English
Article number	e00215-17
Journal	Genome Announcements
Volume	5
Issue number	16
DOIs	https://doi.org/10.1128/genomeA.00215-17
State	Published - Apr 1 2017

Bibliographical note

Publisher Copyright:
© 2017 Browne et al.

Funding

We thank David Kudrna, Univeristy of Arizona, for high-molecular-weight DNA extraction used for PacBio sequencing. This work was supported by the JGI 2010 Community Sequencing Program, grant no. CSP2010-784140 to A.T.K., T.P.D., J.C., O.K., and D.T.F., and by NSF grant CHE-1412648 to A.T.K. The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under contract no. DE-AC02-05CH11231.

Funders	Funder number
National Science Foundation Office of International Science and Engineering
U.S. Department of Energy Chinese Academy of Sciences Guangzhou Municipal Science and Technology Project Oak Ridge National Laboratory Extreme Science and Engineering Discovery Environment National Science Foundation National Energy Research Scientific Computing Center National Natural Science Foundation of China	CHE-1412648
U.S. Department of Energy Oak Ridge National Laboratory U.S. Department of Energy National Science Foundation National Energy Research Scientific Computing Center	DE-AC02-05CH11231

ASJC Scopus subject areas

Molecular Biology
Genetics

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10.1128/genomeA.00215-17

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Browne, D. R., Jenkins, J., Schmutz, J., Shu, S., Barry, K., Grimwood, J., Chiniquy, J., Sharma, A., Niehaus, T. D., Weiss, T. L., Koppisch, A. T., Fox, D. T., Dhungana, S., Okada, S., Chappell, J., & Devarenne, T. P. (2017). Draft nuclear genome sequence of the liquid hydrocarbon-accumulating green microalga botryococcus braunii race B (Showa). Genome Announcements, 5(16), Article e00215-17. https://doi.org/10.1128/genomeA.00215-17

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Browne, DR, Jenkins, J, Schmutz, J, Shu, S, Barry, K, Grimwood, J, Chiniquy, J, Sharma, A, Niehaus, TD, Weiss, TL, Koppisch, AT, Fox, DT, Dhungana, S, Okada, S, Chappell, J & Devarenne, TP 2017, 'Draft nuclear genome sequence of the liquid hydrocarbon-accumulating green microalga botryococcus braunii race B (Showa)', Genome Announcements, vol. 5, no. 16, e00215-17. https://doi.org/10.1128/genomeA.00215-17

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Draft nuclear genome sequence of the liquid hydrocarbon-accumulating green microalga botryococcus braunii race B (Showa)

Abstract

Bibliographical note

Funding

ASJC Scopus subject areas

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