TY - JOUR
T1 - Image-based analysis to dissect vertical distribution and horizontal asymmetry of conspecific root system interactions in response to planting densities, nutrients and root exudates in Arabidopsis Thaliana
AU - Geisler-Lee, Jane
AU - Liu, Xian
AU - Rang, Wei
AU - Raveendiran, Jayanthan
AU - Szubryt, Marisa Blake
AU - Gibson, David John
AU - Geisler, Matt
AU - Cheng, Qiang
N1 - Publisher Copyright:
© 2017 by the authors.
PY - 2017/12
Y1 - 2017/12
N2 - Intraspecific competition is an important plant interaction that has been studied extensively aboveground, but less so belowground, due to the difficulties in accessing the root system experimentally. Recent in vivo and in situ automatic imaging advances help understand root system architecture. In this study, a portable imaging platform and a scalable transplant technique were applied to test intraspecific competition in Arabidopsis thaliana. A single green fluorescent protein labeled plant was placed in the center of a grid of different planting densities of neighboring unlabeled plants or empty spaces, into which different treatments were made to the media. The root system of the central plant showed changes in the vertical distribution with increasing neighbor density, becoming more positively kurtotic, and developing an increasing negative skew with time. Horizontal root distribution was initially asymmetric, but became more evenly circular with time, and mean direction was not affected by the presence of adjacent empty spaces as initially hypothesized. To date, this is the first study to analyze the patterns of both vertical and horizontal growth in conspecific root systems. We present a portable imaging platform with simplicity, accessibility, and scalability, to capture the dynamic interactions of plant root systems.
AB - Intraspecific competition is an important plant interaction that has been studied extensively aboveground, but less so belowground, due to the difficulties in accessing the root system experimentally. Recent in vivo and in situ automatic imaging advances help understand root system architecture. In this study, a portable imaging platform and a scalable transplant technique were applied to test intraspecific competition in Arabidopsis thaliana. A single green fluorescent protein labeled plant was placed in the center of a grid of different planting densities of neighboring unlabeled plants or empty spaces, into which different treatments were made to the media. The root system of the central plant showed changes in the vertical distribution with increasing neighbor density, becoming more positively kurtotic, and developing an increasing negative skew with time. Horizontal root distribution was initially asymmetric, but became more evenly circular with time, and mean direction was not affected by the presence of adjacent empty spaces as initially hypothesized. To date, this is the first study to analyze the patterns of both vertical and horizontal growth in conspecific root systems. We present a portable imaging platform with simplicity, accessibility, and scalability, to capture the dynamic interactions of plant root systems.
KW - Arabidopsis thaliana
KW - Conspecific root
KW - Imaging
KW - Root system
KW - Skewness and kurtosis
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U2 - 10.3390/plants6040046
DO - 10.3390/plants6040046
M3 - Article
AN - SCOPUS:85032677013
VL - 6
JO - Plants
JF - Plants
IS - 4
M1 - 46
ER -