Improved draft genome sequence of Microbacterium sp. Strain LKL04, a bacterial endophyte associated with switchgrass plants

Mohammad Radhi Sahib; Piao Yang; Norbert Bokros; Nicole Shapiro; Tanja Woyke; Nikos C. Kyrpides; Ye Xia; Seth DeBolt

doi:10.1128/MRA.00927-19

Improved draft genome sequence of Microbacterium sp. Strain LKL04, a bacterial endophyte associated with switchgrass plants

Mohammad Radhi Sahib, Piao Yang, Norbert Bokros, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Ye Xia, Seth DeBolt

Research output: Contribution to journal › Article › peer-review

11 Scopus citations

Abstract

We report here the genome assembly and analysis of Microbacterium strain sp. LKL04, a Gram-positive bacterial endophyte isolated from switchgrass plants (Panicum virgatum) grown on a reclaimed coal-mining site. The 2.9-Mbp genome of this bacterium was assembled into a single contig encoding 2,806 protein coding genes.

Original language	English
Article number	e00927-19
Journal	Microbiology Resource Announcements
Volume	8
Issue number	45
DOIs	https://doi.org/10.1128/MRA.00927-19
State	Published - 2019

Bibliographical note

Publisher Copyright:
Copyright © 2019 Sahib et al.

Funding

Genome sequencing and data annotation were carried out in the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility supported under contract DE-AC02-05CH11231. This work was also partially supported by the Hatch Project from USDA-NIFA-OHO01392 and by OARD Seed Award OHOA-1615 at The Ohio State University. supported under contract DE-AC02-05CH11231. This work was also partially supported by the Hatch Project from USDA-NIFA-OHO01392 and by OARD Seed Award OHOA-1615 at The Ohio State University.

Funders	Funder number
OARD	OHOA-1615
U.S. Department of Energy EPSCoR
Office of Science Programs	DE-AC02-05CH11231, USDA-NIFA-OHO01392
Ohio Water Resources Center, Ohio State University
Joint Genome Institute

ASJC Scopus subject areas

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

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10.1128/MRA.00927-19

Cite this

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abstract = "We report here the genome assembly and analysis of Microbacterium strain sp. LKL04, a Gram-positive bacterial endophyte isolated from switchgrass plants (Panicum virgatum) grown on a reclaimed coal-mining site. The 2.9-Mbp genome of this bacterium was assembled into a single contig encoding 2,806 protein coding genes.",

author = "Sahib, \{Mohammad Radhi\} and Piao Yang and Norbert Bokros and Nicole Shapiro and Tanja Woyke and Kyrpides, \{Nikos C.\} and Ye Xia and Seth DeBolt",

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AU - Yang, Piao

AU - Bokros, Norbert

AU - Shapiro, Nicole

AU - Woyke, Tanja

AU - Kyrpides, Nikos C.

AU - Xia, Ye

AU - DeBolt, Seth

PY - 2019

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AB - We report here the genome assembly and analysis of Microbacterium strain sp. LKL04, a Gram-positive bacterial endophyte isolated from switchgrass plants (Panicum virgatum) grown on a reclaimed coal-mining site. The 2.9-Mbp genome of this bacterium was assembled into a single contig encoding 2,806 protein coding genes.

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Improved draft genome sequence of Microbacterium sp. Strain LKL04, a bacterial endophyte associated with switchgrass plants

Abstract

Bibliographical note

Funding

ASJC Scopus subject areas

Access to Document

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