TY - JOUR
T1 - Molecular diversity of terpene synthases in the liverwort marchantia polymorpha
AU - Kumar, Santosh
AU - Kempinski, Chase
AU - Zhuang, Xun
AU - Norris, Ayla
AU - Mafu, Sibongile
AU - Zi, Jiachen
AU - Bell, Stephen A.
AU - Nybo, Stephen Eric
AU - Kinison, Scott E.
AU - Jiang, Zuodong
AU - Goklany, Sheba
AU - Linscott, Kristin B.
AU - Chen, Xinlu
AU - Jia, Qidong
AU - Brown, Shoshana D.
AU - Bowman, John L.
AU - Babbitt, Patricia C.
AU - Peters, Reuben J.
AU - Chen, Feng
AU - Chappell, Joe
N1 - Publisher Copyright:
© 2016 American Society of Plant Biologists. All rights reserved.
PY - 2016/10
Y1 - 2016/10
N2 - Marchantia polymorpha is a basal terrestrial land plant, which like most liverworts accumulates structurally diverse terpenes believed to serve in deterring disease and herbivory. Previous studies have suggested that the mevalonate and methylerythritol phosphate pathways, present in evolutionarily diverged plants, are also operative in liverworts. However, the genes and enzymes responsible for the chemical diversity of terpenes have yet to be described. In this study, we resorted to a HMMER search tool to identify 17 putative terpene synthase genes from M. polymorpha transcriptomes. Functional characterization identified four diterpene synthase genes phylogenetically related to those found in diverged plants and nine rather unusual monoterpene and sesquiterpene synthase-like genes. The presence of separate monofunctional diterpene synthases for ent-copalyl diphosphate and ent-kaurene biosynthesis is similar to orthologs found in vascular plants, pushing the date of the underlying gene duplication and neofunctionalization of the ancestral diterpene synthase gene family to >400 million years ago. By contrast, the mono- and sesquiterpene synthases represent a distinct class of enzymes, not related to previously described plant terpene synthases and only distantly so to microbial-type terpene synthases. The absence of a Mg2+ binding, aspartate-rich, DDXXD motif places these enzymes in a noncanonical family of terpene synthases.
AB - Marchantia polymorpha is a basal terrestrial land plant, which like most liverworts accumulates structurally diverse terpenes believed to serve in deterring disease and herbivory. Previous studies have suggested that the mevalonate and methylerythritol phosphate pathways, present in evolutionarily diverged plants, are also operative in liverworts. However, the genes and enzymes responsible for the chemical diversity of terpenes have yet to be described. In this study, we resorted to a HMMER search tool to identify 17 putative terpene synthase genes from M. polymorpha transcriptomes. Functional characterization identified four diterpene synthase genes phylogenetically related to those found in diverged plants and nine rather unusual monoterpene and sesquiterpene synthase-like genes. The presence of separate monofunctional diterpene synthases for ent-copalyl diphosphate and ent-kaurene biosynthesis is similar to orthologs found in vascular plants, pushing the date of the underlying gene duplication and neofunctionalization of the ancestral diterpene synthase gene family to >400 million years ago. By contrast, the mono- and sesquiterpene synthases represent a distinct class of enzymes, not related to previously described plant terpene synthases and only distantly so to microbial-type terpene synthases. The absence of a Mg2+ binding, aspartate-rich, DDXXD motif places these enzymes in a noncanonical family of terpene synthases.
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U2 - 10.1105/tpc.16.00062
DO - 10.1105/tpc.16.00062
M3 - Article
C2 - 27650333
AN - SCOPUS:84995422219
SN - 1040-4651
VL - 28
SP - 2632
EP - 2650
JO - Plant Cell
JF - Plant Cell
IS - 10
ER -