Synthesis and crystal structures of 3,6-dihydroxy-picolinic acid and its labile intermediate dipotassium 3-hydroxy-6-(sulfonatooxy)pyridine-2-carboxylate monohydrate

Edward J. Behrman, Sean Parkin

Research output: Contribution to journalArticlepeer-review

Abstract

A simplified two-step synthesis of 3,6-dihydroxypicolinic acid (3-hydroxy-6-oxo-1,6-dihydropyridine-2-carboxylic acid), C6H5NO4 (II), an intermediate in the metabolism of picolinic acid, is described. The crystal structure of II, along with that of a labile intermediate, dipotassium 3-hydroxy-6-(sulfonatooxy)-pyridine-2-carboxylate monohydrate, 2K+.C6H3NO7S2-.H2O (I), is also described. Compound I comprises a pyridine ring with carboxylate, hydroxyl (connected by an intramolecular O—H. . .O hydrogen bond), and sulfate groups at the 2-, 3-, and 6-positions, respectively, along with two potassium cations for charge balance and one water molecule of crystallization. These components are connected into a three-dimensional network by O—H. . .O hydrogen bonds arising from the water molecule, C—H. . .O interactions and p–p stacking of pyridine rings. In II, the ring nitrogen atom is protonated, with charge balance provided by the carboxylate group (i.e., a zwitterion). The intramolecular O—H. . .O hydrogen bond observed in I is preserved in II. Crystals of II have unusual space-group symmetry of type Abm2 in which extended planar networks of O—H. . .O and N—H. . .O hydrogen-bonded molecules form sheets lying parallel to the ac plane, constrained to b = 0.25 (and 0.75). The structure was refined as a 50:50 inversion twin. A minor disorder component was modeled by reflection of the major component across a mirror plane perpendicular to c.

Original languageEnglish
Pages (from-to)588-591
Number of pages4
JournalActa Crystallographica Section E: Crystallographic Communications
Volume77
DOIs
StatePublished - Jun 1 2021

Bibliographical note

Publisher Copyright:
© 2021 International Union of Crystallography. All rights reserved.

Keywords

  • Crystal structure
  • Disorder
  • Elbs oxidation
  • Hydrogen bonding
  • Inversion twinning
  • Space group Abm2

ASJC Scopus subject areas

  • General Chemistry
  • General Materials Science
  • Condensed Matter Physics

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