The three-dimensional structure of the cytoplasmic domains of EpsF from the type 2 secretion system of Vibrio cholerae

Jan Abendroth, Daniel D. Mitchell, Konstantin V. Korotkov, Tanya L. Johnson, Allison Kreger, Maria Sandkvist, Wim G.J. Hol

Research output: Contribution to journalArticlepeer-review

43 Scopus citations

Abstract

The type 2 secretion system (T2SS), a multi-protein machinery that spans both the inner and the outer membranes of Gram-negative bacteria, is used for the secretion of several critically important proteins across the outer membrane. Here we report the crystal structure of the N-terminal cytoplasmic domain of EpsF, an inner membrane spanning T2SS protein from Vibrio cholerae. This domain consists of a bundle of six anti-parallel helices and adopts a fold that has not been described before. The long C-terminal helix α6 protrudes from the body of the domain and most likely continues as the first transmembrane helix of EpsF. Two N-terminal EpsF domains form a tight dimer with a conserved interface, suggesting that the observed dimer occurs in the T2SS of many bacteria. Two calcium binding sites are present in the dimer interface with ligands provided for each site by both subunits. Based on this new structure, sequence comparisons of EpsF homologs and localization studies of GFP fused with EpsF, we propose that the second cytoplasmic domain of EpsF adopts a similar fold as the first cytoplasmic domain and that full-length EpsF, and its T2SS homologs, have a three-transmembrane helix topology.

Original languageEnglish
Pages (from-to)303-315
Number of pages13
JournalJournal of Structural Biology
Volume166
Issue number3
DOIs
StatePublished - Jun 2009

Bibliographical note

Funding Information:
We acknowledge Stewart Turley for expert help with data collection and Michael Bagdasarian at Michigan State University for anti-EpsF antiserum. We thank the staff of beamline 9.2 at the Stanford Synchrotron Radiation Lightsource for support during data collection. This research was supported by NIH grant AI34501 to W.G.J.H. from the National Institute of Allergy and Infectious Diseases (NIAID) and by the Howard Hughes Medical Institute (HHMI) and by grant AI49294 from NIAID to M.S. The content is solely the responsibility of the authors and does not necessarily represent the official views of the HHMI, NIAID or the National Institutes of Health.

Keywords

  • General secretory pathway
  • GspF
  • PilG
  • Type 4 pilin biogenesis
  • XcpS

ASJC Scopus subject areas

  • Structural Biology

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