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Neuro293: A REST-knockout HEK-293 cell line enables the expression of neuron-restricted genes for the high-throughput testing of human neurobiology and the biochemistry of neuronal proteins

  • Joshua T. Moses
  • , Fahad B. Shah
  • , Nicholas M. McVay
  • , Dylan E. Capes
  • , Christopher C. Bosse-Joseph
  • , Jocelyn Salazar
  • , Victoria K. Slone
  • , John E. Eberth
  • , Jonathan Satin
  • , Andrew N. Stewart

Producción científica: Articlerevisión exhaustiva

Resumen

Efficient interrogation of neurobiology remains bottlenecked by obtaining mature neurons. Immortalized cell lines still require lengthy differentiation periods to obtain neuron-like cells, which may not efficiently differentiate and are challenging to transfect with plasmids relative to other cell lines such as HEK-293's. To overcome challenges with limited access to cells that express mature neuronal proteins, we knocked out the RE1-silencing transcription factor (REST) from HEK-293's to create a novel neuron-like cell, which we name Neuro293. RNA-sequencing and bioinformatics analyses revealed a significant upregulation of genes associated with neurobiology and membrane excitability including pre-/post-synaptic proteins, voltage gated ion channels, neuron-cytoskeleton, as well as neurotransmitter synthesis, packaging, and release. Western blot validated the upregulation of Synapsin-1 (Syn1) and Snap-25 as two neuron-restricted proteins, as well as the potassium channel Kv1.2. Immunocytochemistry against Neurofilament 200 kd revealed a significant upregulation and accumulation in singular processes extending from Neuro293's cell body. Similarly, while Syn1 increased in the cell body, Syn1 protein accumulated at the ends of processes extruding from Neuro293's. Neuro293's express reporter-genes through the Syn1 promoter after infection with adeno-associated viruses (AAV). However, transient transfection with AAV2 plasmids led to leaky expression through promoter-independent mechanisms. Despite an upregulation of many voltage-gated ion channels, Neuro293's do not possess excitable membranes. Collectively, REST-knockout in HEK-293's induces a quickly dividing and easily transfectable cell line that expresses neuron-restricted and mature neuronal proteins which can be used for high-throughput biochemical interrogation, however, without further modifications neither HEK-293's or Neuro293's exhibit properties of excitable membranes.

Idioma originalEnglish
Número de artículobpaf036
PublicaciónBiology Methods and Protocols
Volumen10
N.º1
DOI
EstadoPublished - 2025

Nota bibliográfica

Publisher Copyright:
© 2025 The Author(s).

Financiación

We thank the University of Kentuckys Flow Cytometry and Immune Monitoring Core, and Novogene for providing RNA- sequencing services. We also acknowledge the following distributors of plasmids from Addgene.com: pAAV-hSyn-mCherry was a gift from Karl Deisseroth (Addgene plasmid # 114472; http://n2t. net/addgene:114472; RRID: Addgene-114472). pAAV-hSyn-Cre-P2A- dTomato was a gift from Rylan Larsen (Addgene plasmid # 107738; http://n2t.net/addgene:107738; RRID: Addgene-107738). pAAV- mCAMK-RFP was a gift from Edward Callaway (Addgene plasmid # 22908; http://n2t.net/addgene:22908; RRID: Addgene-22908). pHB9- EGFP (Hb9 promoter) [TJ#96] was a gift from Thomas Jessell (Addgene plasmid # 16275; http://n2t.net/addgene:16275; RRID: Addgene-16275). Work was funded by the start-up funds provided by the University of Kentucky s College of Medicine, Spinal Cord and Brain Injury Research Center, Department of Radiology, and the Jay Caplan Research Foundation.

FinanciadoresNúmero del financiador
Brain Injury Research Center Endowment
Department of Radiology
Jay Caplan Research Foundation
University of Kentucky16275, Addgene-114472, 114472, Addgene-16275, Addgene-107738, 22908, Addgene-22908, 107738

    ASJC Scopus subject areas

    • General Biochemistry, Genetics and Molecular Biology
    • General Agricultural and Biological Sciences

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